sarscov_gbk = getgenbank('NC_045512');
%Calculate nucleotide count of the Covid19 virus genome sequence.
sarscov_virus = sarscov_gbk.Sequence;
%Identify the length of the nucleotide
sarscov_virus_length = length(sarscov_virus)
basecount(sarscov_virus )
%Visualize the nucleotide count.
figure
basecount(sarscov_virus ,'chart','pie');
title('Distribution of Nucleotide Bases for SARS Covid19 Virus');
figure
dimers = dimercount(sarscov_virus,'chart','bar')
title('SARS Covid19 Virus Genome Dimer Histogram');
Map = geneticcode
for frame = 1:3 figure
subplot(2,1,1)
codoncount(sarscov_virus,'frame',frame,'figure',true,'geneticcode','none')
end
%Visualize ORF of nucleotide sequence.
seqshoworfs(sarscov_virus);
orfs = seqshoworfs(sarscov_virus,'GeneticCode','Standard','AlternativeStartCodons',true)
%Identify the three highest codon numbers in the nucleotide.
gbkStruct = getgenbank('NC_045512')
features = featureparse(gbkStruct,'Sequence',true)
coding_sequences = features.CDS;
coding_sequences_id = sprintf('%s ',coding_sequences.gene)
POLYCDS = coding_sequences(1)
fseq=fastaread('sequencecovid.fasta')
[h,l] = featureview(gbkStruct,{'CDS','tRNA','rRNA','D_loop'},...
[2 1 2 2 2],'Fontsize',9);
legend(h,l,'interpreter','none');
title('Covid-19 Virus, complete genome')
figure
subplot(2,1,1)
CVaaCount = aacount(fseq,'chart','bar');
title('Histogram of Amino Acid Count for the SARS Covid-19 Protein');
CV = nt2aa(fseq,'GeneticCode','Standard');
disp(seqdisp(CV))
%Identify the three highest codon numbers in the nucleotide.
codons = codoncount(fseq)
% Top 3 Highest Codon is TTT, TGT and TAA based on Heatmap
%Look up the amino acids for codons in (5)
TTT_aa = aminolookup('code',nt2aa('TTT'))
TGT_aa = aminolookup('code',nt2aa('TGT'))
TAA_aa = aminolookup('code',nt2aa('TAA'))
figure
count = codoncount(fseq,'figure',true);
title('Covid-19 Virus Genome Codon Frequency')
%Convert a nucleotide sequence to an amino acid sequence
CVSeq = nt2aa(fseq,'geneticcode','Standard')
CVprotein = getgenpept('YP_009724389','sequenceonly',true)
aacount(CVSeq, 'chart','bar')
covidpro = getgenpept('YP_009724389')
covidproAC = atomiccomp(covidpro)
covidproAC.C
covidproMW = molweight(covidpro)
Output
sarscov_virus_length = 29903
ans = struct with fields: A: 8954 C: 5492 G: 5863 T: 9594
dimers = struct with fields: AA: 2880 AC: 2023 AG: 1742 AT: 2308 CA: 2084 CC: 888 CG: 439 CT: 2081 GA: 1612 GC: 1168 GG: 1093 GT: 1990 TA: 2377 TC: 1413 TG: 2589 TT: 3215
Map = struct with fields: Name: 'Standard' AAA: 'K' AAC: 'N' AAG: 'K' AAT: 'N' ACA: 'T' ACC: 'T' ACG: 'T' ACT: 'T' AGA: 'R' AGC: 'S' AGG: 'R' AGT: 'S' ATA: 'I' ATC: 'I' ATG: 'M' ATT: 'I' CAA: 'Q' CAC: 'H' CAG: 'Q' CAT: 'H' CCA: 'P' CCC: 'P' CCG: 'P' CCT: 'P' CGA: 'R' CGC: 'R' CGG: 'R' CGT: 'R' CTA: 'L' CTC: 'L' CTG: 'L' CTT: 'L' GAA: 'E' GAC: 'D' GAG: 'E' GAT: 'D' GCA: 'A' GCC: 'A' GCG: 'A' GCT: 'A' GGA: 'G' GGC: 'G' GGG: 'G' GGT: 'G' GTA: 'V' GTC: 'V' GTG: 'V' GTT: 'V' TAA: '*' TAC: 'Y' TAG: '*' TAT: 'Y' TCA: 'S' TCC: 'S' TCG: 'S' TCT: 'S' TGA: '*' TGC: 'C' TGG: 'W' TGT: 'C' TTA: 'L' TTC: 'F' TTG: 'L' TTT: 'F' Starts: {'ATG' 'CTG' 'TTG'}
AAA - 303 AAC - 212 AAG - 110 AAT - 260 ACA - 249 ACC - 150 ACG - 60 ACT - 220 AGA - 277 AGC - 141 AGG - 123 AGT - 197 ATA - 116 ATC - 112 ATG - 117 ATT - 208 CAA - 233 CAC - 160 CAG - 92 CAT - 172 CCA - 115 CCC - 42 CCG - 28 CCT - 107 CGA - 31 CGC - 40 CGG - 33 CGT - 54 CTA - 110 CTC - 78 CTG - 80 CTT - 208 GAA - 186 GAC - 123 GAG - 84 GAT - 167 GCA - 116 GCC - 68 GCG - 22 GCT - 169 GGA - 112 GGC - 84 GGG - 49 GGT - 149 GTA - 121 GTC - 101 GTG - 93 GTT - 233 TAA - 342 TAC - 227 TAG - 128 TAT - 278 TCA - 173 TCC - 75 TCG - 34 TCT - 190 TGA - 304 TGC - 268 TGG - 263 TGT - 367 TTA - 232 TTC - 210 TTG - 178 TTT - 383
AAA - 337 AAC - 190 AAG - 222 AAT - 315 ACA - 288 ACC - 101 ACG - 42 ACT - 291 AGA - 130 AGC - 54 AGG - 78 AGT - 152 ATA - 182 ATC - 106 ATG - 311 ATT - 278 CAA - 246 CAC - 108 CAG - 163 CAT - 136 CCA - 139 CCC - 31 CCG - 19 CCT - 146 CGA - 28 CGC - 29 CGG - 20 CGT - 67 CTA - 184 CTC - 93 CTG - 150 CTT - 259 GAA - 252 GAC - 142 GAG - 116 GAT - 214 GCA - 158 GCC - 73 GCG - 37 GCT - 265 GGA - 99 GGC - 90 GGG - 34 GGT - 245 GTA - 174 GTC - 101 GTG - 181 GTT - 311 TAA - 95 TAC - 182 TAG - 89 TAT - 213 TCA - 189 TCC - 56 TCG - 39 TCT - 217 TGA - 71 TGC - 87 TGG - 99 TGT - 211 TTA - 283 TTC - 140 TTG - 277 TTT - 332
AAA - 283 AAC - 213 AAG - 248 AAT - 186 ACA - 272 ACC - 125 ACG - 62 ACT - 163 AGA - 198 AGC - 106 AGG - 128 AGT - 158 ATA - 173 ATC - 121 ATG - 297 ATT - 287 CAA - 224 CAC - 191 CAG - 183 CAT - 176 CCA - 100 CCC - 43 CCG - 27 CCT - 91 CGA - 36 CGC - 28 CGG - 23 CGT - 50 CTA - 267 CTC - 116 CTG - 265 CTT - 271 GAA - 97 GAC - 75 GAG - 97 GAT - 59 GCA - 98 GCC - 46 GCG - 29 GCT - 87 GGA - 71 GGC - 49 GGG - 51 GGT - 60 GTA - 174 GTC - 67 GTG - 278 GTT - 156 TAA - 282 TAC - 200 TAG - 210 TAT - 131 TCA - 187 TCC - 78 TCG - 40 TCT - 135 TGA - 255 TGC - 192 TGG - 192 TGT - 280 TTA - 361 TTC - 168 TTG - 362 TTT - 289
gbkStruct = struct with fields: LocusName: 'NC_045512' LocusSequenceLength: '29903' LocusNumberofStrands: 'ss-' LocusTopology: 'linear' LocusMoleculeType: 'RNA' LocusGenBankDivision: 'VRL' LocusModificationDate: '18-JUL-2020' Definition: 'Severe acute respiratory syndrome coronavirus 2 isolate Wuhan-Hu-1, complete genome.' Accession: 'NC_045512' Version: 'NC_045512.2' GI: '' Project: [] DBLink: 'BioProject: PRJNA485481' Keywords: 'RefSeq.' Segment: [] Source: 'Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)' SourceOrganism: [4×65 char] Reference: {[1×1 struct] [1×1 struct] [1×1 struct] [1×1 struct] [1×1 struct] [1×1 struct]} Comment: [17×67 char] Features: [617×74 char] CDS: [1×12 struct] Sequence: 'attaaaggtttataccttcccaggtaacaaaccaaccaactttcgatctcttgtagatctgttctctaaacgaactttaaaatctgtgtggctgtcactcggctgcatgcttagtgcactcacgcagtataattaataactaattactgtcgttgacaggacacgagtaactcgtctatcttctgcaggctgcttacggtttcgtccgtgttgcagccgatcatcagcacatctaggtttcgtccgggtgtgaccgaaaggtaagatggagagccttgtccctggtttcaacgagaaaacacacgtccaactcagtttgcctgttttacaggttcgcgacgtgctcgtacgtggctttggagactccgtggaggaggtcttatcagaggcacgtcaacatcttaaagatggcacttgtggcttagtagaagttgaaaaaggcgttttgcctcaacttgaacagccctatgtgttcatcaaacgttcggatgctcgaactgcacctcatggtcatgttatggttgagctggtagcagaactcgaaggcattcagtacggtcgtagtggtgagacacttggtgtccttgtccctcatgtgggcgaaataccagtggcttaccgcaaggttcttcttcgtaagaacggtaataaaggagctggtggccatagttacggcgccgatctaaagtcatttgacttaggcgacgagcttggcactgatccttatgaagattttcaagaaaactggaacactaaacatagcagtggtgttacccgtgaactcatgcgtgagcttaacggaggggcatacactcgctatgtcgataacaacttctgtggccctgatggctaccctcttgagtgcattaaagaccttctagcacgtgctggtaaagcttcatgcactttgtccgaacaactggactttattgacactaagaggggtgtatactgctgccgtgaacatgagcatgaaattgcttggtacacggaacgttctgaaaagagctatgaattgcagacaccttttgaaattaaattggcaaagaaatttgacaccttcaatggggaatgtccaaattttgtatttcccttaaattccataatcaagactattcaaccaagggttgaaaagaaaaagcttgatggctttatgggtagaattcgatctgtctatccagttgcgtcaccaaatgaatgcaaccaaatgtgcctttcaactctcatgaagtgtgatcattgtggtgaaacttcatggcagacgggcgattttgttaaagccacttgcgaattttgtggcactgagaatttgactaaagaaggtgccactacttgtggttacttaccccaaaatgctgttgttaaaatttattgtccagcatgtcacaattcagaagtaggacctgagcatagtcttgccgaataccataatgaatctggcttgaaaaccattcttcgtaagggtggtcgcactattgcctttggaggctgtgtgttctcttatgttggttgccataacaagtgtgcctattgggttccacgtgctagcgctaacataggttgtaaccatacaggtgttgttggagaaggttccgaaggtcttaatgacaaccttcttgaaatactccaaaaagagaaagtcaacatcaatattgttggtgactttaaacttaatgaagagatcgccattattttggcatctttttctgcttccacaagtgcttttgtggaaactgtgaaaggtttggattataaagcattcaaacaaattgttgaatcctgtggtaattttaaagttacaaaaggaaaagctaaaaaaggtgcctggaatattggtgaacagaaatcaatactgagtcctctttatgcatttgcatcagaggctgctcgtgttgtacgatcaattttctcccgcactcttgaaactgctcaaaattctgtgcgtgttttacagaaggccgctataacaatactagatggaatttcacagtattcactgagactcattgatgctatgatgttcacatctgatttggctactaacaatctagttgtaatggcctacattacaggtggtgttgttcagttgacttcgcagtggctaactaacatctttggcactgtttatgaaaaactcaaacccgtccttgattggcttgaagagaagtttaaggaaggtgtagagtttcttagagacggttgggaaattgttaaatttatctcaacctgtgcttgtgaaattgtcggtggacaaattgtcacctgtgcaaaggaaattaaggagagtgttcagacattctttaagcttgtaaataaatttttggctttgtgtgctgactctatcattattggtggagctaaacttaaagccttgaatttaggtgaaacatttgtcacgcactcaaagggattgtacagaaagtgtgttaaatccagagaagaaactggcctactcatgcctctaaaagccccaaaagaaattatcttcttagagggagaaacacttcccacagaagtgttaacagaggaagttgtcttgaaaactggtgatttacaaccattagaacaacctactagtgaagctgttgaagctccattggttggtacaccagtttgtattaacgggcttatgttgctcgaaatcaaagacacagaaaagtactgtgcccttgcacctaatatgatggtaacaaacaataccttcacactcaaaggcggtgcaccaacaaaggttacttttggtgatgacactgtgatagaagtgcaaggttacaagagtgtgaatatcacttttgaacttgatgaaaggattgataaagtacttaatgagaagtgctctgcctatacagttgaactcggtacagaagtaaatgagttcgcctgtgttgtggcagatgctgtcataaaaactttgcaaccagtatctgaattacttacaccactgggcattgatttagatgagtggagtatggctacatactacttatttgatgagtctggtgagtttaaattggcttcacatatgtattgttctttctaccctccagatgaggatgaagaagaaggtgattgtgaagaagaagagtttgagccatcaactcaatatgagtatggtactgaagatgattaccaaggtaaacctttggaatttggtgccacttctgctgctcttcaacctgaagaagagcaagaagaagattggttagatgatgatagtcaacaaactgttggtcaacaagacggcagtgaggacaatcagacaactactattcaaacaattgttgaggttcaacctcaattagagatggaacttacaccagttgttcagactattgaagtgaatagttttagtggttatttaaaacttactgacaatgtatacattaaaaatgcagacattgtggaagaagctaaaaaggtaaaaccaacagtggttgttaatgcagccaatgtttaccttaaacatggaggaggtgttgcaggagccttaaataaggctactaacaatgccatgcaagttgaatctgatgattacatagctactaatggaccacttaaagtgggtggtagttgtgttttaagcggacacaatcttgctaaacactgtcttcatgttgtcggcccaaatgttaacaaaggtgaagacattcaacttcttaagagtgcttatgaaaattttaatcagcacgaagttctacttgcaccattattatcagctggtatttttggtgctgaccctatacattctttaagagtttgtgtagatactgttcgcacaaatgtctacttagctgtctttgataaaaatctctatgacaaacttgtttcaagctttttggaaatgaagagtgaaaagcaagttgaacaaaagatcgctgagattcctaaagaggaagttaagccatttataactgaaagtaaaccttcagttgaacagagaaaacaagatgataagaaaatcaaagcttgtgttgaagaagttacaacaactctggaagaaactaagttcctcacagaaaacttgttactttatattgacattaatggcaatcttcatccagattctgccactcttgttagtgacattgacatcactttcttaaagaaagatgctccatatatagtgggtgatgttgttcaagagggtgttttaactgctgtggttatacctactaaaaaggctggtggcactactgaaatgctagcgaaagctttgagaaaagtgccaacagacaattatataaccacttacccgggtcagggtttaaatggttacactgtagaggaggcaaagacagtgcttaaaaagtgtaaaagtgccttttacattctaccatctattatctctaatgagaagcaagaaattcttggaactgtttcttggaatttgcgagaaatgcttgcacatgcagaagaaacacgcaaattaatgcctgtctgtgtggaaactaaagccatagtttcaactatacagcgtaaatataagggtattaaaatacaagagggtgtggttgattatggtgctagattttacttttacaccagtaaaacaactgtagcgtcacttatcaacacacttaacgatctaaatgaaactcttgttacaatgccacttggctatgtaacacatggcttaaatttggaagaagctgctcggtatatgagatctctcaaagtgccagctacagtttctgtttcttcacctgatgctgttacagcgtataatggttatcttacttcttcttctaaaacacctgaagaacattttattgaaaccatctcacttgctggttcctataaagattggtcctattctggacaatctacacaactaggtatagaatttcttaagagaggtgataaaagtgtatattacactagtaatcctaccacattccacctagatggtgaagttatcacctttgacaatcttaagacacttctttctttgagagaagtgaggactattaaggtgtttacaacagtagacaacattaacctccacacgcaagttgtggacatgtcaatgacatatggacaacagtttggtccaacttatttggatggagctgatgttactaaaataaaacctcataattcacatgaaggtaaaacattttatgttttacctaatgatgacactctacgtgttgaggcttttgagtactaccacacaactgatcctagttttctgggtaggtacatgtcagcattaaatcacactaaaaagtggaaatacccacaagttaatggtttaacttctattaaatgggcagataacaactgttatcttgccactgcattgttaacactccaacaaatagagttgaagtttaatccacctgctctacaagatgcttattacagagcaagggctggtgaagctgctaacttttgtgcacttatcttagcctactgtaataagacagtaggtgagttaggtgatgttagagaaacaatgagttacttgtttcaacatgccaatttagattcttgcaaaagagtcttgaacgtggtgtgtaaaacttgtggacaacagcagacaacccttaagggtgtagaagctgttatgtacatgggcacactttcttatgaacaatttaagaaaggtgttcagataccttgtacgtgtggtaaacaagctacaaaatatctagtacaacaggagtcaccttttgttatgatgtcagcaccacctgctcagtatgaacttaagcatggtacatttacttgtgctagtgagtacactggtaattaccagtgtggtcactataaacatataacttctaaagaaactttgtattgcatagacggtgctttacttacaaagtcctcagaatacaaaggtcctattacggatgttttctacaaagaaaacagttacacaacaaccataaaaccagttacttataaattggatggtgttgtttgtacagaaattgaccctaagttggacaattattataagaaagacaattcttatttcacagagcaaccaattgatcttgtaccaaaccaaccatatccaaacgcaagcttcgataattttaagtttgtatgtgataatatcaaatttgctgatgatttaaaccagttaactggttataagaaacctgcttcaagagagcttaaagttacatttttccctgacttaaatggtgatgtggtggctattgattataaacactacacaccctcttttaagaaaggagctaaattgttacataaacctattgtttggcatgttaacaatgcaactaataaagccacgtataaaccaaatacctggtgtatacgttgtctttggagcacaaaaccagttgaaacatcaaattcgtttgatgtactgaagtcagaggacgcgcagggaatggataatcttgcctgcgaagatctaaaaccagtctctgaagaagtagtggaaaatcctaccatacagaaagacgttcttgagtgtaatgtgaaaactaccgaagttgtaggagacattatacttaaaccagcaaataatagtttaaaaattacagaagaggttggccacacagatctaatggctgcttatgtagacaattctagtcttactattaagaaacctaatgaattatctagagtattaggtttgaaaacccttgctactcatggtttagctgctgttaatagtgtcccttgggatactatagctaattatgctaagccttttcttaacaaagttgttagtacaactactaacatagttacacggtgtttaaaccgtgtttgtactaattatatgccttatttctttactttattgctacaattgtgtacttttactagaagtacaaattctagaattaaagcatctatgccgactactatagcaaagaatactgttaagagtgtcggtaaattttgtctagaggcttcatttaattatttgaagtcacctaatttttctaaactgataaatattataatttggtttttactattaagtgtttgcctaggttctttaatctactcaaccgctgctttaggtgttttaatgtctaatttaggcatgccttcttactgtactggttacagagaaggctatttgaactctactaatgtcactattgcaacctactgtactggttctataccttgtagtgtttgtcttagtggtttagattctttagacacctatccttctttagaaactatacaaattaccatttcatcttttaaatgggatttaactgcttttggcttagttgcagagtggtttttggcatatattcttttcactaggtttttctatgtacttggattggctgcaatcatgcaattgtttttcagctattttgcagtacattttattagtaattcttggcttatgtggttaataattaatcttgtacaaatggccccgatttcagctatggttagaatgtacatcttctttgcatcattttattatgtatggaaaagttatgtgcatgttgtagacggttgtaattcatcaacttgtatgatgtgttacaaacgtaatagagcaacaagagtcgaatgtacaactattgttaatggtgttagaaggtccttttatgtctatgctaatggaggtaaaggcttttgcaaactacacaattggaattgtgttaattgtgatacattctgtgctggtagtacatttattagtgatgaagttgcgagagacttgtcactacagtttaaaagaccaataaatcctactgaccagtcttcttacatcgttgatagtgttacagtgaagaatggttccatccatctttactttgataaagctggtcaaaagacttatgaaagacattctctctctcattttgttaacttagacaacctgagagctaataacactaaaggttcattgcctattaatgttatagtttttgatggtaaatcaaaatgtgaagaatcatctgcaaaatcagcgtctgtttactacagtcagcttatgtgtcaacctatactgttactagatcaggcattagtgtctgatgttggtgatagtgcggaagttgcagttaaaatgtttgatgcttacgttaatacgttttcatcaacttttaacgtaccaatggaaaaactcaaaacactagttgcaactgcagaagctgaacttgcaaagaatgtgtccttagacaatgtcttatctacttttatttcagcagctcggcaagggtttgttgattcagatgtagaaactaaagatgttgttgaatgtcttaaattgtcacatcaatctgacatagaagttactggcgatagttgtaataactatatgctcacctataacaaagttgaaaacatgacaccccgtgaccttggtgcttgtattgactgtagtgcgcgtcatattaatgcgcaggtagcaaaaagtcacaacattgctttgatatggaacgttaaagatttcatgtcattgtctgaacaactacgaaaacaaatacgtagtgctgctaaaaagaataacttaccttttaagttgacatgtgcaactactagacaagttgttaatgttgtaacaacaaagatagcacttaagggtggtaaaattgttaataattggttgaagcagttaattaaagttacacttgtgttcctttttgttgctgctattttctatttaataacacctgttcatgtcatgtctaaacatactgacttttcaagtgaaatcataggatacaaggctattgatggtggtgtcactcgtgacatagcatctacagatacttgttttgctaacaaacatgctgattttgacacatggtttagccagcgtggtggtagttatactaatgacaaagcttgcccattgattgctgcagtcataacaagagaagtgggttttgtcgtgcctggtttgcctggcacgatattacgcacaactaatggtgactttttgcatttcttacctagagtttttagtgcagttggtaacatctgttacacaccatcaaaacttatagagtacactgactttgcaacatcagcttgtgttttggctgctgaatgtacaatttttaaagatgcttctggtaagccagtaccatattgttatgataccaatgtactagaaggttctgttgcttatgaaagtttacgccctgacacacgttatgtgctcatggatggctctattattcaatttcctaacacctaccttgaaggttctgttagagtggtaacaacttttgattctgagtactgtaggcacggcacttgtgaaagatcagaagctggtgtttgtgtatctactagtggtagatgggtacttaacaatgattattacagatctttaccaggagttttctgtggtgtagatgctgtaaatttacttactaatatgtttacaccactaattcaacctattggtgctttggacatatcagcatctatagtagctggtggtattgtagctatcgtagtaacatgccttgcctactattttatgaggtttagaagagcttttggtgaatacagtcatgtagttgcctttaatactttactattccttatgtcattcactgtactctgtttaacaccagtttactcattcttacctggtgtttattctgttatttacttgtacttgacattttatcttactaatgatgtttcttttttagcacatattcagtggatggttatgttcacacctttagtacctttctggataacaattgcttatatcatttgtatttccacaaagcatttctattggttctttagtaattacctaaagagacgtgtagtctttaatggtgtttcctttagtacttttgaagaagctgcgctgtgcacctttttgttaaataaagaaatgtatctaaagttgcgtagtgatgtgctattacctcttacgcaatataatagatacttagctctttataataagtacaagtattttagtggagcaatggatacaactagctacagagaagctgcttgttgtcatctcgcaaaggctctcaatgacttcagtaactcaggt…' SearchURL: 'https://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=nuccore&id=NC_045512' RetrieveURL: 'https://eutils.ncbi.nlm.nih.gov/entrez/eutils/efetch.fcgi?db=nuccore&id=1798174254&rettype=gb&retmode=text'
features = struct with fields: source: [1×1 struct] five_prime_UTR: [1×1 struct] gene: [1×11 struct] CDS: [1×12 struct] mat_peptide: [1×26 struct] stem_loop: [1×5 struct] three_prime_UTR: [1×1 struct]
coding_sequences_id = 'ORF1ab ORF1ab S ORF3a E M ORF6 ORF7a ORF7b ORF8 N ORF10 '
POLYCDS = struct with fields: Location: 'join(266..13468,13468..21555)' Indices: [266 13468 13468 21555] gene: 'ORF1ab' locus_tag: 'GU280_gp01' ribosomal_slippage: 1 note: 'pp1ab; translated by -1 ribosomal frameshift' codon_start: '1' product: 'ORF1ab polyprotein' protein_id: 'YP_009724389.1' db_xref: 'GeneID:43740578' translation: 'MESLVPGFNEKTHVQLSLPVLQVRDVLVRGFGDSVEEVLSEARQHLKDGTCGLVEVEKGVLPQLEQPYVFIKRSDARTAPHGHVMVELVAELEGIQYGRSGETLGVLVPHVGEIPVAYRKVLLRKNGNKGAGGHSYGADLKSFDLGDELGTDPYEDFQENWNTKHSSGVTRELMRELNGGAYTRYVDNNFCGPDGYPLECIKDLLARAGKASCTLSEQLDFIDTKRGVYCCREHEHEIAWYTERSEKSYELQTPFEIKLAKKFDTFNGECPNFVFPLNSIIKTIQPRVEKKKLDGFMGRIRSVYPVASPNECNQMCLSTLMKCDHCGETSWQTGDFVKATCEFCGTENLTKEGATTCGYLPQNAVVKIYCPACHNSEVGPEHSLAEYHNESGLKTILRKGGRTIAFGGCVFSYVGCHNKCAYWVPRASANIGCNHTGVVGEGSEGLNDNLLEILQKEKVNINIVGDFKLNEEIAIILASFSASTSAFVETVKGLDYKAFKQIVESCGNFKVTKGKAKKGAWNIGEQKSILSPLYAFASEAARVVRSIFSRTLETAQNSVRVLQKAAITILDGISQYSLRLIDAMMFTSDLATNNLVVMAYITGGVVQLTSQWLTNIFGTVYEKLKPVLDWLEEKFKEGVEFLRDGWEIVKFISTCACEIVGGQIVTCAKEIKESVQTFFKLVNKFLALCADSIIIGGAKLKALNLGETFVTHSKGLYRKCVKSREETGLLMPLKAPKEIIFLEGETLPTEVLTEEVVLKTGDLQPLEQPTSEAVEAPLVGTPVCINGLMLLEIKDTEKYCALAPNMMVTNNTFTLKGGAPTKVTFGDDTVIEVQGYKSVNITFELDERIDKVLNEKCSAYTVELGTEVNEFACVVADAVIKTLQPVSELLTPLGIDLDEWSMATYYLFDESGEFKLASHMYCSFYPPDEDEEEGDCEEEEFEPSTQYEYGTEDDYQGKPLEFGATSAALQPEEEQEEDWLDDDSQQTVGQQDGSEDNQTTTIQTIVEVQPQLEMELTPVVQTIEVNSFSGYLKLTDNVYIKNADIVEEAKKVKPTVVVNAANVYLKHGGGVAGALNKATNNAMQVESDDYIATNGPLKVGGSCVLSGHNLAKHCLHVVGPNVNKGEDIQLLKSAYENFNQHEVLLAPLLSAGIFGADPIHSLRVCVDTVRTNVYLAVFDKNLYDKLVSSFLEMKSEKQVEQKIAEIPKEEVKPFITESKPSVEQRKQDDKKIKACVEEVTTTLEETKFLTENLLLYIDINGNLHPDSATLVSDIDITFLKKDAPYIVGDVVQEGVLTAVVIPTKKAGGTTEMLAKALRKVPTDNYITTYPGQGLNGYTVEEAKTVLKKCKSAFYILPSIISNEKQEILGTVSWNLREMLAHAEETRKLMPVCVETKAIVSTIQRKYKGIKIQEGVVDYGARFYFYTSKTTVASLINTLNDLNETLVTMPLGYVTHGLNLEEAARYMRSLKVPATVSVSSPDAVTAYNGYLTSSSKTPEEHFIETISLAGSYKDWSYSGQSTQLGIEFLKRGDKSVYYTSNPTTFHLDGEVITFDNLKTLLSLREVRTIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKTFYVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNGLTSIKWADNNCYLATALLTLQQIELKFNPPALQDAYYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLKGVEAVMYMGTLSYEQFKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCIDGALLTKSSEYKGPITDVFYKENSYTTTIKPVTYKLDGVVCTEIDPKLDNYYKKDNSYFTEQPIDLVPNQPYPNASFDNFKFVCDNIKFADDLNQLTGYKKPASRELKVTFFPDLNGDVVAIDYKHYTPSFKKGAKLLHKPIVWHVNNATNKATYKPNTWCIRCLWSTKPVETSNSFDVLKSEDAQGMDNLACEDLKPVSEEVVENPTIQKDVLECNVKTTEVVGDIILKPANNSLKITEEVGHTDLMAAYVDNSSLTIKKPNELSRVLGLKTLATHGLAAVNSVPWDTIANYAKPFLNKVVSTTTNIVTRCLNRVCTNYMPYFFTLLLQLCTFTRSTNSRIKASMPTTIAKNTVKSVGKFCLEASFNYLKSPNFSKLINIIIWFLLLSVCLGSLIYSTAALGVLMSNLGMPSYCTGYREGYLNSTNVTIATYCTGSIPCSVCLSGLDSLDTYPSLETIQITISSFKWDLTAFGLVAEWFLAYILFTRFFYVLGLAAIMQLFFSYFAVHFISNSWLMWLIINLVQMAPISAMVRMYIFFASFYYVWKSYVHVVDGCNSSTCMMCYKRNRATRVECTTIVNGVRRSFYVYANGGKGFCKLHNWNCVNCDTFCAGSTFISDEVARDLSLQFKRPINPTDQSSYIVDSVTVKNGSIHLYFDKAGQKTYERHSLSHFVNLDNLRANNTKGSLPINVIVFDGKSKCEESSAKSASVYYSQLMCQPILLLDQALVSDVGDSAEVAVKMFDAYVNTFSSTFNVPMEKLKTLVATAEAELAKNVSLDNVLSTFISAARQGFVDSDVETKDVVECLKLSHQSDIEVTGDSCNNYMLTYNKVENMTPRDLGACIDCSARHINAQVAKSHNIALIWNVKDFMSLSEQLRKQIRSAAKKNNLPFKLTCATTRQVVNVVTTKIALKGGKIVNNWLKQLIKVTLVFLFVAAIFYLITPVHVMSKHTDFSSEIIGYKAIDGGVTRDIASTDTCFANKHADFDTWFSQRGGSYTNDKACPLIAAVITREVGFVVPGLPGTILRTTNGDFLHFLPRVFSAVGNICYTPSKLIEYTDFATSACVLAAECTIFKDASGKPVPYCYDTNVLEGSVAYESLRPDTRYVLMDGSIIQFPNTYLEGSVRVVTTFDSEYCRHGTCERSEAGVCVSTSGRWVLNNDYYRSLPGVFCGVDAVNLLTNMFTPLIQPIGALDISASIVAGGIVAIVVTCLAYYFMRFRRAFGEYSHVVAFNTLLFLMSFTVLCLTPVYSFLPGVYSVIYLYLTFYLTNDVSFLAHIQWMVMFTPLVPFWITIAYIICISTKHFYWFFSNYLKRRVVFNGVSFSTFEEAALCTFLLNKEMYLKLRSDVLLPLTQYNRYLALYNKYKYFSGAMDTTSYREAACCHLAKALNDFSNSGSDVLYQPPQTSITSAVLQSGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPKYKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTITVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQCSGVTFQSAVKRTIKGTHHWLLLTILTSLLVLVQSTQWSLFFFLYENAFLPFAMGIIAMSAFAMMFVKHKHAFLCLFLLPSLATVAYFNMVYMPASWVMRIMTWLDMVDTSLSGFKLKDCVMYASAVVLLILMTARTVYDDGARRVWTLMNVLTLVYKVYYGNALDQAISMWALIISVTSNYSGVVTTVMFLARGIVFMCVEYCPIFFITGNTLQCIMLVYCFLGYFCTCYFGLFCLLNRYFRLTLGVYDYLVSTQEFRYMNSQGLLPPKNSIDAFKLNIKLLGVGGKPCIKVATVQSKMSDVKCTSVVLLSVLQQLRVESSSKLWAQCVQLHNDILLAKDTTEAFEKMVSLLSVLLSMQGAVDINKLCEEMLDNRATLQAIASEFSSLPSYAAFATAQEAYEQAVANGDSEVVLKKLKKSLNVAKSEFDRDAAMQRKLEKMADQAMTQMYKQARSEDKRAKVTSAMQTMLFTMLRKLDNDALNNIINNARDGCVPLNIIPLTTAAKLMVVIPDYNTYKNTCDGTTFTYASALWEIQQVVDADSKIVQLSEISMDNSPNLAWPLIVTALRANSAVKLQNNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQAGNATEVPANSTVLSFCAFAVDAAKAYKDYLASGGQPITNCVKMLCTHTGTGQAITVTPEANMDQESFGGASCCLYCRCHIDHPNPKGFCDLKGKYVQIPTTCANDPVGFTLKNTVCTVCGMWKGYGCSCDQLREPMLQSADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQAVGACVLCNSQTSLRCGACIRRPFLCCKCCYDHVISTSHKLVLSVNPYVCNAPGCDVTDVTQLYLGGMSYYCKSHKPPISFPLCANGQVFGLYKNTCVGSDNVTDFNAIATCDWTNAGDYILANTCTERLKLFAAETLKATEETFKLSYGIATVREVLSDRELHLSWEVGKPRPPLNRNYVFTGYRVTKNSKVQIGEYTFEKGDYGDAVVYRGTTTYKLNVGDYFVLTSHTVMPLSAPTLVPQEHYVRITGLYPTLNISDEFSSNVANYQKVGMQKYSTLQGPPGTGKSHFAIGLALYYPSARIVYTACSHAAVDALCEKALKYLPIDKCSRIIPARARVECFDKFKVNSTLEQYVFCTVNALPETTADIVVFDEISMATNYDLSVVNARLRAKHYVYIGDPAQLPAPRTLLTKGTLEPEYFNSVCRLMKTIGPDMFLGTCRRCPAEIVDTVSALVYDNKLKAHKDKSAQCFKMFYKGVITHDVSSAINRPQIGVVREFLTRNPAWRKAVFISPYNSQNAVASKILGLPTQTVDSSQGSEYDYVIFTQTTETAHSCNVNRFNVAITRAKVGILCIMSDRDLYDKLQFTSLEIPRRNVATLQAENVTGLFKDCSKVITGLHPTQAPTHLSVDTKFKTEGLCVDIPGIPKDMTYRRLISMMGFKMNYQVNGYPNMFITREEAIRHVRAWIGFDVEGCHATREAVGTNLPLQLGFSTGVNLVAVPTGYVDTPNNTDFSRVSAKPPPGDQFKHLIPLMYKGLPWNVVRIKIVQMLSDTLKNLSDRVVFVLWAHGFELTSMKYFVKIGPERTCCLCDRRATCFSTASDTYACWHHSIGFDYVYNPFMIDVQQWGFTGNLQSNHDLYCQVHGNAHVASCDAIMTRCLAVHECFVKRVDWTIEYPIIGDELKINAACRKVQHMVVKAALLADKFPVLHDIGNPKAIKCVPQADVEWKFYDAQPCSDKAYKIEELFYSYATHSDKFTDGVCLFWNCNVDRYPANSIVCRFDTRVLSNLNLPGCDGGSLYVNKHAFHTPAFDKSAFVNLKQLPFFYYSDSPCESHGKQVVSDIDYVPLKSATCITRCNLGGAVCRHHANEYRLYLDAYNMMISAGFSLWVYKQFDTYNLWNTFTRLQSLENVAFNVVNKGHFDGQQGEVPVSIINNTVYTKVDGVDVELFENKTTLPVNVAFELWAKRNIKPVPEVKILNNLGVDIAANTVIWDYKRDAPAHISTIGVCSMTDIAKKPTETICAPLTVFFDGRVDGQVDLFRNARNGVLITEGSVKGLQPSVGPKQASLNGVTLIGEAVKTQFNYYKKVDGVVQQLPETYFTQSRNLQEFKPRSQMEIDFLELAMDEFIERYKLEGYAFEHIVYGDFSHSQLGGLHLLIGLAKRFKESPFELEDFIPMDSTVKNYFITDAQTGSSKCVCSVIDLLLDDFVEIIKSQDLSVVSKVVKVTIDYTEISFMLWCKDGHVETFYPKLQSSQAWQPGVAMPNLYKMQRMLLEKCDLQNYGDSATLPKGIMMNVAKYTQLCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGTAVLRQWLPTGTLLVDSDLNDFVSDADSTLIGDCATVHTANKWDLIISDMYDPKTKNVTKENDSKEGFFTYICGFIQQKLALGGSVAIKITEHSWNADLYKLMGHFAWWTAFVTNVNASSSEAFLIGCNYLGKPREQIDGYVMHANYIFWRNTNPIQLSSYSLFDMSKFPLKLRGTAVMSLKEGQINDMILSLLSKGRLIIRENNRVVISSDVLVNN' Sequence: 'atggagagccttgtccctggtttcaacgagaaaacacacgtccaactcagtttgcctgttttacaggttcgcgacgtgctcgtacgtggctttggagactccgtggaggaggtcttatcagaggcacgtcaacatcttaaagatggcacttgtggcttagtagaagttgaaaaaggcgttttgcctcaacttgaacagccctatgtgttcatcaaacgttcggatgctcgaactgcacctcatggtcatgttatggttgagctggtagcagaactcgaaggcattcagtacggtcgtagtggtgagacacttggtgtccttgtccctcatgtgggcgaaataccagtggcttaccgcaaggttcttcttcgtaagaacggtaataaaggagctggtggccatagttacggcgccgatctaaagtcatttgacttaggcgacgagcttggcactgatccttatgaagattttcaagaaaactggaacactaaacatagcagtggtgttacccgtgaactcatgcgtgagcttaacggaggggcatacactcgctatgtcgataacaacttctgtggccctgatggctaccctcttgagtgcattaaagaccttctagcacgtgctggtaaagcttcatgcactttgtccgaacaactggactttattgacactaagaggggtgtatactgctgccgtgaacatgagcatgaaattgcttggtacacggaacgttctgaaaagagctatgaattgcagacaccttttgaaattaaattggcaaagaaatttgacaccttcaatggggaatgtccaaattttgtatttcccttaaattccataatcaagactattcaaccaagggttgaaaagaaaaagcttgatggctttatgggtagaattcgatctgtctatccagttgcgtcaccaaatgaatgcaaccaaatgtgcctttcaactctcatgaagtgtgatcattgtggtgaaacttcatggcagacgggcgattttgttaaagccacttgcgaattttgtggcactgagaatttgactaaagaaggtgccactacttgtggttacttaccccaaaatgctgttgttaaaatttattgtccagcatgtcacaattcagaagtaggacctgagcatagtcttgccgaataccataatgaatctggcttgaaaaccattcttcgtaagggtggtcgcactattgcctttggaggctgtgtgttctcttatgttggttgccataacaagtgtgcctattgggttccacgtgctagcgctaacataggttgtaaccatacaggtgttgttggagaaggttccgaaggtcttaatgacaaccttcttgaaatactccaaaaagagaaagtcaacatcaatattgttggtgactttaaacttaatgaagagatcgccattattttggcatctttttctgcttccacaagtgcttttgtggaaactgtgaaaggtttggattataaagcattcaaacaaattgttgaatcctgtggtaattttaaagttacaaaaggaaaagctaaaaaaggtgcctggaatattggtgaacagaaatcaatactgagtcctctttatgcatttgcatcagaggctgctcgtgttgtacgatcaattttctcccgcactcttgaaactgctcaaaattctgtgcgtgttttacagaaggccgctataacaatactagatggaatttcacagtattcactgagactcattgatgctatgatgttcacatctgatttggctactaacaatctagttgtaatggcctacattacaggtggtgttgttcagttgacttcgcagtggctaactaacatctttggcactgtttatgaaaaactcaaacccgtccttgattggcttgaagagaagtttaaggaaggtgtagagtttcttagagacggttgggaaattgttaaatttatctcaacctgtgcttgtgaaattgtcggtggacaaattgtcacctgtgcaaaggaaattaaggagagtgttcagacattctttaagcttgtaaataaatttttggctttgtgtgctgactctatcattattggtggagctaaacttaaagccttgaatttaggtgaaacatttgtcacgcactcaaagggattgtacagaaagtgtgttaaatccagagaagaaactggcctactcatgcctctaaaagccccaaaagaaattatcttcttagagggagaaacacttcccacagaagtgttaacagaggaagttgtcttgaaaactggtgatttacaaccattagaacaacctactagtgaagctgttgaagctccattggttggtacaccagtttgtattaacgggcttatgttgctcgaaatcaaagacacagaaaagtactgtgcccttgcacctaatatgatggtaacaaacaataccttcacactcaaaggcggtgcaccaacaaaggttacttttggtgatgacactgtgatagaagtgcaaggttacaagagtgtgaatatcacttttgaacttgatgaaaggattgataaagtacttaatgagaagtgctctgcctatacagttgaactcggtacagaagtaaatgagttcgcctgtgttgtggcagatgctgtcataaaaactttgcaaccagtatctgaattacttacaccactgggcattgatttagatgagtggagtatggctacatactacttatttgatgagtctggtgagtttaaattggcttcacatatgtattgttctttctaccctccagatgaggatgaagaagaaggtgattgtgaagaagaagagtttgagccatcaactcaatatgagtatggtactgaagatgattaccaaggtaaacctttggaatttggtgccacttctgctgctcttcaacctgaagaagagcaagaagaagattggttagatgatgatagtcaacaaactgttggtcaacaagacggcagtgaggacaatcagacaactactattcaaacaattgttgaggttcaacctcaattagagatggaacttacaccagttgttcagactattgaagtgaatagttttagtggttatttaaaacttactgacaatgtatacattaaaaatgcagacattgtggaagaagctaaaaaggtaaaaccaacagtggttgttaatgcagccaatgtttaccttaaacatggaggaggtgttgcaggagccttaaataaggctactaacaatgccatgcaagttgaatctgatgattacatagctactaatggaccacttaaagtgggtggtagttgtgttttaagcggacacaatcttgctaaacactgtcttcatgttgtcggcccaaatgttaacaaaggtgaagacattcaacttcttaagagtgcttatgaaaattttaatcagcacgaagttctacttgcaccattattatcagctggtatttttggtgctgaccctatacattctttaagagtttgtgtagatactgttcgcacaaatgtctacttagctgtctttgataaaaatctctatgacaaacttgtttcaagctttttggaaatgaagagtgaaaagcaagttgaacaaaagatcgctgagattcctaaagaggaagttaagccatttataactgaaagtaaaccttcagttgaacagagaaaacaagatgataagaaaatcaaagcttgtgttgaagaagttacaacaactctggaagaaactaagttcctcacagaaaacttgttactttatattgacattaatggcaatcttcatccagattctgccactcttgttagtgacattgacatcactttcttaaagaaagatgctccatatatagtgggtgatgttgttcaagagggtgttttaactgctgtggttatacctactaaaaaggctggtggcactactgaaatgctagcgaaagctttgagaaaagtgccaacagacaattatataaccacttacccgggtcagggtttaaatggttacactgtagaggaggcaaagacagtgcttaaaaagtgtaaaagtgccttttacattctaccatctattatctctaatgagaagcaagaaattcttggaactgtttcttggaatttgcgagaaatgcttgcacatgcagaagaaacacgcaaattaatgcctgtctgtgtggaaactaaagccatagtttcaactatacagcgtaaatataagggtattaaaatacaagagggtgtggttgattatggtgctagattttacttttacaccagtaaaacaactgtagcgtcacttatcaacacacttaacgatctaaatgaaactcttgttacaatgccacttggctatgtaacacatggcttaaatttggaagaagctgctcggtatatgagatctctcaaagtgccagctacagtttctgtttcttcacctgatgctgttacagcgtataatggttatcttacttcttcttctaaaacacctgaagaacattttattgaaaccatctcacttgctggttcctataaagattggtcctattctggacaatctacacaactaggtatagaatttcttaagagaggtgataaaagtgtatattacactagtaatcctaccacattccacctagatggtgaagttatcacctttgacaatcttaagacacttctttctttgagagaagtgaggactattaaggtgtttacaacagtagacaacattaacctccacacgcaagttgtggacatgtcaatgacatatggacaacagtttggtccaacttatttggatggagctgatgttactaaaataaaacctcataattcacatgaaggtaaaacattttatgttttacctaatgatgacactctacgtgttgaggcttttgagtactaccacacaactgatcctagttttctgggtaggtacatgtcagcattaaatcacactaaaaagtggaaatacccacaagttaatggtttaacttctattaaatgggcagataacaactgttatcttgccactgcattgttaacactccaacaaatagagttgaagtttaatccacctgctctacaagatgcttattacagagcaagggctggtgaagctgctaacttttgtgcacttatcttagcctactgtaataagacagtaggtgagttaggtgatgttagagaaacaatgagttacttgtttcaacatgccaatttagattcttgcaaaagagtcttgaacgtggtgtgtaaaacttgtggacaacagcagacaacccttaagggtgtagaagctgttatgtacatgggcacactttcttatgaacaatttaagaaaggtgttcagataccttgtacgtgtggtaaacaagctacaaaatatctagtacaacaggagtcaccttttgttatgatgtcagcaccacctgctcagtatgaacttaagcatggtacatttacttgtgctagtgagtacactggtaattaccagtgtggtcactataaacatataacttctaaagaaactttgtattgcatagacggtgctttacttacaaagtcctcagaatacaaaggtcctattacggatgttttctacaaagaaaacagttacacaacaaccataaaaccagttacttataaattggatggtgttgtttgtacagaaattgaccctaagttggacaattattataagaaagacaattcttatttcacagagcaaccaattgatcttgtaccaaaccaaccatatccaaacgcaagcttcgataattttaagtttgtatgtgataatatcaaatttgctgatgatttaaaccagttaactggttataagaaacctgcttcaagagagcttaaagttacatttttccctgacttaaatggtgatgtggtggctattgattataaacactacacaccctcttttaagaaaggagctaaattgttacataaacctattgtttggcatgttaacaatgcaactaataaagccacgtataaaccaaatacctggtgtatacgttgtctttggagcacaaaaccagttgaaacatcaaattcgtttgatgtactgaagtcagaggacgcgcagggaatggataatcttgcctgcgaagatctaaaaccagtctctgaagaagtagtggaaaatcctaccatacagaaagacgttcttgagtgtaatgtgaaaactaccgaagttgtaggagacattatacttaaaccagcaaataatagtttaaaaattacagaagaggttggccacacagatctaatggctgcttatgtagacaattctagtcttactattaagaaacctaatgaattatctagagtattaggtttgaaaacccttgctactcatggtttagctgctgttaatagtgtcccttgggatactatagctaattatgctaagccttttcttaacaaagttgttagtacaactactaacatagttacacggtgtttaaaccgtgtttgtactaattatatgccttatttctttactttattgctacaattgtgtacttttactagaagtacaaattctagaattaaagcatctatgccgactactatagcaaagaatactgttaagagtgtcggtaaattttgtctagaggcttcatttaattatttgaagtcacctaatttttctaaactgataaatattataatttggtttttactattaagtgtttgcctaggttctttaatctactcaaccgctgctttaggtgttttaatgtctaatttaggcatgccttcttactgtactggttacagagaaggctatttgaactctactaatgtcactattgcaacctactgtactggttctataccttgtagtgtttgtcttagtggtttagattctttagacacctatccttctttagaaactatacaaattaccatttcatcttttaaatgggatttaactgcttttggcttagttgcagagtggtttttggcatatattcttttcactaggtttttctatgtacttggattggctgcaatcatgcaattgtttttcagctattttgcagtacattttattagtaattcttggcttatgtggttaataattaatcttgtacaaatggccccgatttcagctatggttagaatgtacatcttctttgcatcattttattatgtatggaaaagttatgtgcatgttgtagacggttgtaattcatcaacttgtatgatgtgttacaaacgtaatagagcaacaagagtcgaatgtacaactattgttaatggtgttagaaggtccttttatgtctatgctaatggaggtaaaggcttttgcaaactacacaattggaattgtgttaattgtgatacattctgtgctggtagtacatttattagtgatgaagttgcgagagacttgtcactacagtttaaaagaccaataaatcctactgaccagtcttcttacatcgttgatagtgttacagtgaagaatggttccatccatctttactttgataaagctggtcaaaagacttatgaaagacattctctctctcattttgttaacttagacaacctgagagctaataacactaaaggttcattgcctattaatgttatagtttttgatggtaaatcaaaatgtgaagaatcatctgcaaaatcagcgtctgtttactacagtcagcttatgtgtcaacctatactgttactagatcaggcattagtgtctgatgttggtgatagtgcggaagttgcagttaaaatgtttgatgcttacgttaatacgttttcatcaacttttaacgtaccaatggaaaaactcaaaacactagttgcaactgcagaagctgaacttgcaaagaatgtgtccttagacaatgtcttatctacttttatttcagcagctcggcaagggtttgttgattcagatgtagaaactaaagatgttgttgaatgtcttaaattgtcacatcaatctgacatagaagttactggcgatagttgtaataactatatgctcacctataacaaagttgaaaacatgacaccccgtgaccttggtgcttgtattgactgtagtgcgcgtcatattaatgcgcaggtagcaaaaagtcacaacattgctttgatatggaacgttaaagatttcatgtcattgtctgaacaactacgaaaacaaatacgtagtgctgctaaaaagaataacttaccttttaagttgacatgtgcaactactagacaagttgttaatgttgtaacaacaaagatagcacttaagggtggtaaaattgttaataattggttgaagcagttaattaaagttacacttgtgttcctttttgttgctgctattttctatttaataacacctgttcatgtcatgtctaaacatactgacttttcaagtgaaatcataggatacaaggctattgatggtggtgtcactcgtgacatagcatctacagatacttgttttgctaacaaacatgctgattttgacacatggtttagccagcgtggtggtagttatactaatgacaaagcttgcccattgattgctgcagtcataacaagagaagtgggttttgtcgtgcctggtttgcctggcacgatattacgcacaactaatggtgactttttgcatttcttacctagagtttttagtgcagttggtaacatctgttacacaccatcaaaacttatagagtacactgactttgcaacatcagcttgtgttttggctgctgaatgtacaatttttaaagatgcttctggtaagccagtaccatattgttatgataccaatgtactagaaggttctgttgcttatgaaagtttacgccctgacacacgttatgtgctcatggatggctctattattcaatttcctaacacctaccttgaaggttctgttagagtggtaacaacttttgattctgagtactgtaggcacggcacttgtgaaagatcagaagctggtgtttgtgtatctactagtggtagatgggtacttaacaatgattattacagatctttaccaggagttttctgtggtgtagatgctgtaaatttacttactaatatgtttacaccactaattcaacctattggtgctttggacatatcagcatctatagtagctggtggtattgtagctatcgtagtaacatgccttgcctactattttatgaggtttagaagagcttttggtgaatacagtcatgtagttgcctttaatactttactattccttatgtcattcactgtactctgtttaacaccagtttactcattcttacctggtgtttattctgttatttacttgtacttgacattttatcttactaatgatgtttcttttttagcacatattcagtggatggttatgttcacacctttagtacctttctggataacaattgcttatatcatttgtatttccacaaagcatttctattggttctttagtaattacctaaagagacgtgtagtctttaatggtgtttcctttagtacttttgaagaagctgcgctgtgcacctttttgttaaataaagaaatgtatctaaagttgcgtagtgatgtgctattacctcttacgcaatataatagatacttagctctttataataagtacaagtattttagtggagcaatggatacaactagctacagagaagctgcttgttgtcatctcgcaaaggctctcaatgacttcagtaactcaggttctgatgttctttaccaaccaccacaaacctctatcacctcagctgttttgcagagtggttttagaaaaatggcattcccatctggtaaagttgagggttgtatggtacaagtaacttgtggtacaactacacttaacggtctttggcttgatgacgtagtttactgtccaagacatgtgatctgcacctctgaagacatgcttaaccctaattatgaagatttactcattcgtaagtctaatcataatttcttggtacaggctg…' gene_synonym: []
fseq = struct with fields: Header: 'NC_045512.2 Severe acute respiratory syndrome coronavirus 2 isolate Wuhan-Hu-1, complete genome' Sequence: 'ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTCCCTGGTTTCAACGAGAAAACACACGTCCAACTCAGTTTGCCTGTTTTACAGGTTCGCGACGTGCTCGTACGTGGCTTTGGAGACTCCGTGGAGGAGGTCTTATCAGAGGCACGTCAACATCTTAAAGATGGCACTTGTGGCTTAGTAGAAGTTGAAAAAGGCGTTTTGCCTCAACTTGAACAGCCCTATGTGTTCATCAAACGTTCGGATGCTCGAACTGCACCTCATGGTCATGTTATGGTTGAGCTGGTAGCAGAACTCGAAGGCATTCAGTACGGTCGTAGTGGTGAGACACTTGGTGTCCTTGTCCCTCATGTGGGCGAAATACCAGTGGCTTACCGCAAGGTTCTTCTTCGTAAGAACGGTAATAAAGGAGCTGGTGGCCATAGTTACGGCGCCGATCTAAAGTCATTTGACTTAGGCGACGAGCTTGGCACTGATCCTTATGAAGATTTTCAAGAAAACTGGAACACTAAACATAGCAGTGGTGTTACCCGTGAACTCATGCGTGAGCTTAACGGAGGGGCATACACTCGCTATGTCGATAACAACTTCTGTGGCCCTGATGGCTACCCTCTTGAGTGCATTAAAGACCTTCTAGCACGTGCTGGTAAAGCTTCATGCACTTTGTCCGAACAACTGGACTTTATTGACACTAAGAGGGGTGTATACTGCTGCCGTGAACATGAGCATGAAATTGCTTGGTACACGGAACGTTCTGAAAAGAGCTATGAATTGCAGACACCTTTTGAAATTAAATTGGCAAAGAAATTTGACACCTTCAATGGGGAATGTCCAAATTTTGTATTTCCCTTAAATTCCATAATCAAGACTATTCAACCAAGGGTTGAAAAGAAAAAGCTTGATGGCTTTATGGGTAGAATTCGATCTGTCTATCCAGTTGCGTCACCAAATGAATGCAACCAAATGTGCCTTTCAACTCTCATGAAGTGTGATCATTGTGGTGAAACTTCATGGCAGACGGGCGATTTTGTTAAAGCCACTTGCGAATTTTGTGGCACTGAGAATTTGACTAAAGAAGGTGCCACTACTTGTGGTTACTTACCCCAAAATGCTGTTGTTAAAATTTATTGTCCAGCATGTCACAATTCAGAAGTAGGACCTGAGCATAGTCTTGCCGAATACCATAATGAATCTGGCTTGAAAACCATTCTTCGTAAGGGTGGTCGCACTATTGCCTTTGGAGGCTGTGTGTTCTCTTATGTTGGTTGCCATAACAAGTGTGCCTATTGGGTTCCACGTGCTAGCGCTAACATAGGTTGTAACCATACAGGTGTTGTTGGAGAAGGTTCCGAAGGTCTTAATGACAACCTTCTTGAAATACTCCAAAAAGAGAAAGTCAACATCAATATTGTTGGTGACTTTAAACTTAATGAAGAGATCGCCATTATTTTGGCATCTTTTTCTGCTTCCACAAGTGCTTTTGTGGAAACTGTGAAAGGTTTGGATTATAAAGCATTCAAACAAATTGTTGAATCCTGTGGTAATTTTAAAGTTACAAAAGGAAAAGCTAAAAAAGGTGCCTGGAATATTGGTGAACAGAAATCAATACTGAGTCCTCTTTATGCATTTGCATCAGAGGCTGCTCGTGTTGTACGATCAATTTTCTCCCGCACTCTTGAAACTGCTCAAAATTCTGTGCGTGTTTTACAGAAGGCCGCTATAACAATACTAGATGGAATTTCACAGTATTCACTGAGACTCATTGATGCTATGATGTTCACATCTGATTTGGCTACTAACAATCTAGTTGTAATGGCCTACATTACAGGTGGTGTTGTTCAGTTGACTTCGCAGTGGCTAACTAACATCTTTGGCACTGTTTATGAAAAACTCAAACCCGTCCTTGATTGGCTTGAAGAGAAGTTTAAGGAAGGTGTAGAGTTTCTTAGAGACGGTTGGGAAATTGTTAAATTTATCTCAACCTGTGCTTGTGAAATTGTCGGTGGACAAATTGTCACCTGTGCAAAGGAAATTAAGGAGAGTGTTCAGACATTCTTTAAGCTTGTAAATAAATTTTTGGCTTTGTGTGCTGACTCTATCATTATTGGTGGAGCTAAACTTAAAGCCTTGAATTTAGGTGAAACATTTGTCACGCACTCAAAGGGATTGTACAGAAAGTGTGTTAAATCCAGAGAAGAAACTGGCCTACTCATGCCTCTAAAAGCCCCAAAAGAAATTATCTTCTTAGAGGGAGAAACACTTCCCACAGAAGTGTTAACAGAGGAAGTTGTCTTGAAAACTGGTGATTTACAACCATTAGAACAACCTACTAGTGAAGCTGTTGAAGCTCCATTGGTTGGTACACCAGTTTGTATTAACGGGCTTATGTTGCTCGAAATCAAAGACACAGAAAAGTACTGTGCCCTTGCACCTAATATGATGGTAACAAACAATACCTTCACACTCAAAGGCGGTGCACCAACAAAGGTTACTTTTGGTGATGACACTGTGATAGAAGTGCAAGGTTACAAGAGTGTGAATATCACTTTTGAACTTGATGAAAGGATTGATAAAGTACTTAATGAGAAGTGCTCTGCCTATACAGTTGAACTCGGTACAGAAGTAAATGAGTTCGCCTGTGTTGTGGCAGATGCTGTCATAAAAACTTTGCAACCAGTATCTGAATTACTTACACCACTGGGCATTGATTTAGATGAGTGGAGTATGGCTACATACTACTTATTTGATGAGTCTGGTGAGTTTAAATTGGCTTCACATATGTATTGTTCTTTCTACCCTCCAGATGAGGATGAAGAAGAAGGTGATTGTGAAGAAGAAGAGTTTGAGCCATCAACTCAATATGAGTATGGTACTGAAGATGATTACCAAGGTAAACCTTTGGAATTTGGTGCCACTTCTGCTGCTCTTCAACCTGAAGAAGAGCAAGAAGAAGATTGGTTAGATGATGATAGTCAACAAACTGTTGGTCAACAAGACGGCAGTGAGGACAATCAGACAACTACTATTCAAACAATTGTTGAGGTTCAACCTCAATTAGAGATGGAACTTACACCAGTTGTTCAGACTATTGAAGTGAATAGTTTTAGTGGTTATTTAAAACTTACTGACAATGTATACATTAAAAATGCAGACATTGTGGAAGAAGCTAAAAAGGTAAAACCAACAGTGGTTGTTAATGCAGCCAATGTTTACCTTAAACATGGAGGAGGTGTTGCAGGAGCCTTAAATAAGGCTACTAACAATGCCATGCAAGTTGAATCTGATGATTACATAGCTACTAATGGACCACTTAAAGTGGGTGGTAGTTGTGTTTTAAGCGGACACAATCTTGCTAAACACTGTCTTCATGTTGTCGGCCCAAATGTTAACAAAGGTGAAGACATTCAACTTCTTAAGAGTGCTTATGAAAATTTTAATCAGCACGAAGTTCTACTTGCACCATTATTATCAGCTGGTATTTTTGGTGCTGACCCTATACATTCTTTAAGAGTTTGTGTAGATACTGTTCGCACAAATGTCTACTTAGCTGTCTTTGATAAAAATCTCTATGACAAACTTGTTTCAAGCTTTTTGGAAATGAAGAGTGAAAAGCAAGTTGAACAAAAGATCGCTGAGATTCCTAAAGAGGAAGTTAAGCCATTTATAACTGAAAGTAAACCTTCAGTTGAACAGAGAAAACAAGATGATAAGAAAATCAAAGCTTGTGTTGAAGAAGTTACAACAACTCTGGAAGAAACTAAGTTCCTCACAGAAAACTTGTTACTTTATATTGACATTAATGGCAATCTTCATCCAGATTCTGCCACTCTTGTTAGTGACATTGACATCACTTTCTTAAAGAAAGATGCTCCATATATAGTGGGTGATGTTGTTCAAGAGGGTGTTTTAACTGCTGTGGTTATACCTACTAAAAAGGCTGGTGGCACTACTGAAATGCTAGCGAAAGCTTTGAGAAAAGTGCCAACAGACAATTATATAACCACTTACCCGGGTCAGGGTTTAAATGGTTACACTGTAGAGGAGGCAAAGACAGTGCTTAAAAAGTGTAAAAGTGCCTTTTACATTCTACCATCTATTATCTCTAATGAGAAGCAAGAAATTCTTGGAACTGTTTCTTGGAATTTGCGAGAAATGCTTGCACATGCAGAAGAAACACGCAAATTAATGCCTGTCTGTGTGGAAACTAAAGCCATAGTTTCAACTATACAGCGTAAATATAAGGGTATTAAAATACAAGAGGGTGTGGTTGATTATGGTGCTAGATTTTACTTTTACACCAGTAAAACAACTGTAGCGTCACTTATCAACACACTTAACGATCTAAATGAAACTCTTGTTACAATGCCACTTGGCTATGTAACACATGGCTTAAATTTGGAAGAAGCTGCTCGGTATATGAGATCTCTCAAAGTGCCAGCTACAGTTTCTGTTTCTTCACCTGATGCTGTTACAGCGTATAATGGTTATCTTACTTCTTCTTCTAAAACACCTGAAGAACATTTTATTGAAACCATCTCACTTGCTGGTTCCTATAAAGATTGGTCCTATTCTGGACAATCTACACAACTAGGTATAGAATTTCTTAAGAGAGGTGATAAAAGTGTATATTACACTAGTAATCCTACCACATTCCACCTAGATGGTGAAGTTATCACCTTTGACAATCTTAAGACACTTCTTTCTTTGAGAGAAGTGAGGACTATTAAGGTGTTTACAACAGTAGACAACATTAACCTCCACACGCAAGTTGTGGACATGTCAATGACATATGGACAACAGTTTGGTCCAACTTATTTGGATGGAGCTGATGTTACTAAAATAAAACCTCATAATTCACATGAAGGTAAAACATTTTATGTTTTACCTAATGATGACACTCTACGTGTTGAGGCTTTTGAGTACTACCACACAACTGATCCTAGTTTTCTGGGTAGGTACATGTCAGCATTAAATCACACTAAAAAGTGGAAATACCCACAAGTTAATGGTTTAACTTCTATTAAATGGGCAGATAACAACTGTTATCTTGCCACTGCATTGTTAACACTCCAACAAATAGAGTTGAAGTTTAATCCACCTGCTCTACAAGATGCTTATTACAGAGCAAGGGCTGGTGAAGCTGCTAACTTTTGTGCACTTATCTTAGCCTACTGTAATAAGACAGTAGGTGAGTTAGGTGATGTTAGAGAAACAATGAGTTACTTGTTTCAACATGCCAATTTAGATTCTTGCAAAAGAGTCTTGAACGTGGTGTGTAAAACTTGTGGACAACAGCAGACAACCCTTAAGGGTGTAGAAGCTGTTATGTACATGGGCACACTTTCTTATGAACAATTTAAGAAAGGTGTTCAGATACCTTGTACGTGTGGTAAACAAGCTACAAAATATCTAGTACAACAGGAGTCACCTTTTGTTATGATGTCAGCACCACCTGCTCAGTATGAACTTAAGCATGGTACATTTACTTGTGCTAGTGAGTACACTGGTAATTACCAGTGTGGTCACTATAAACATATAACTTCTAAAGAAACTTTGTATTGCATAGACGGTGCTTTACTTACAAAGTCCTCAGAATACAAAGGTCCTATTACGGATGTTTTCTACAAAGAAAACAGTTACACAACAACCATAAAACCAGTTACTTATAAATTGGATGGTGTTGTTTGTACAGAAATTGACCCTAAGTTGGACAATTATTATAAGAAAGACAATTCTTATTTCACAGAGCAACCAATTGATCTTGTACCAAACCAACCATATCCAAACGCAAGCTTCGATAATTTTAAGTTTGTATGTGATAATATCAAATTTGCTGATGATTTAAACCAGTTAACTGGTTATAAGAAACCTGCTTCAAGAGAGCTTAAAGTTACATTTTTCCCTGACTTAAATGGTGATGTGGTGGCTATTGATTATAAACACTACACACCCTCTTTTAAGAAAGGAGCTAAATTGTTACATAAACCTATTGTTTGGCATGTTAACAATGCAACTAATAAAGCCACGTATAAACCAAATACCTGGTGTATACGTTGTCTTTGGAGCACAAAACCAGTTGAAACATCAAATTCGTTTGATGTACTGAAGTCAGAGGACGCGCAGGGAATGGATAATCTTGCCTGCGAAGATCTAAAACCAGTCTCTGAAGAAGTAGTGGAAAATCCTACCATACAGAAAGACGTTCTTGAGTGTAATGTGAAAACTACCGAAGTTGTAGGAGACATTATACTTAAACCAGCAAATAATAGTTTAAAAATTACAGAAGAGGTTGGCCACACAGATCTAATGGCTGCTTATGTAGACAATTCTAGTCTTACTATTAAGAAACCTAATGAATTATCTAGAGTATTAGGTTTGAAAACCCTTGCTACTCATGGTTTAGCTGCTGTTAATAGTGTCCCTTGGGATACTATAGCTAATTATGCTAAGCCTTTTCTTAACAAAGTTGTTAGTACAACTACTAACATAGTTACACGGTGTTTAAACCGTGTTTGTACTAATTATATGCCTTATTTCTTTACTTTATTGCTACAATTGTGTACTTTTACTAGAAGTACAAATTCTAGAATTAAAGCATCTATGCCGACTACTATAGCAAAGAATACTGTTAAGAGTGTCGGTAAATTTTGTCTAGAGGCTTCATTTAATTATTTGAAGTCACCTAATTTTTCTAAACTGATAAATATTATAATTTGGTTTTTACTATTAAGTGTTTGCCTAGGTTCTTTAATCTACTCAACCGCTGCTTTAGGTGTTTTAATGTCTAATTTAGGCATGCCTTCTTACTGTACTGGTTACAGAGAAGGCTATTTGAACTCTACTAATGTCACTATTGCAACCTACTGTACTGGTTCTATACCTTGTAGTGTTTGTCTTAGTGGTTTAGATTCTTTAGACACCTATCCTTCTTTAGAAACTATACAAATTACCATTTCATCTTTTAAATGGGATTTAACTGCTTTTGGCTTAGTTGCAGAGTGGTTTTTGGCATATATTCTTTTCACTAGGTTTTTCTATGTACTTGGATTGGCTGCAATCATGCAATTGTTTTTCAGCTATTTTGCAGTACATTTTATTAGTAATTCTTGGCTTATGTGGTTAATAATTAATCTTGTACAAATGGCCCCGATTTCAGCTATGGTTAGAATGTACATCTTCTTTGCATCATTTTATTATGTATGGAAAAGTTATGTGCATGTTGTAGACGGTTGTAATTCATCAACTTGTATGATGTGTTACAAACGTAATAGAGCAACAAGAGTCGAATGTACAACTATTGTTAATGGTGTTAGAAGGTCCTTTTATGTCTATGCTAATGGAGGTAAAGGCTTTTGCAAACTACACAATTGGAATTGTGTTAATTGTGATACATTCTGTGCTGGTAGTACATTTATTAGTGATGAAGTTGCGAGAGACTTGTCACTACAGTTTAAAAGACCAATAAATCCTACTGACCAGTCTTCTTACATCGTTGATAGTGTTACAGTGAAGAATGGTTCCATCCATCTTTACTTTGATAAAGCTGGTCAAAAGACTTATGAAAGACATTCTCTCTCTCATTTTGTTAACTTAGACAACCTGAGAGCTAATAACACTAAAGGTTCATTGCCTATTAATGTTATAGTTTTTGATGGTAAATCAAAATGTGAAGAATCATCTGCAAAATCAGCGTCTGTTTACTACAGTCAGCTTATGTGTCAACCTATACTGTTACTAGATCAGGCATTAGTGTCTGATGTTGGTGATAGTGCGGAAGTTGCAGTTAAAATGTTTGATGCTTACGTTAATACGTTTTCATCAACTTTTAACGTACCAATGGAAAAACTCAAAACACTAGTTGCAACTGCAGAAGCTGAACTTGCAAAGAATGTGTCCTTAGACAATGTCTTATCTACTTTTATTTCAGCAGCTCGGCAAGGGTTTGTTGATTCAGATGTAGAAACTAAAGATGTTGTTGAATGTCTTAAATTGTCACATCAATCTGACATAGAAGTTACTGGCGATAGTTGTAATAACTATATGCTCACCTATAACAAAGTTGAAAACATGACACCCCGTGACCTTGGTGCTTGTATTGACTGTAGTGCGCGTCATATTAATGCGCAGGTAGCAAAAAGTCACAACATTGCTTTGATATGGAACGTTAAAGATTTCATGTCATTGTCTGAACAACTACGAAAACAAATACGTAGTGCTGCTAAAAAGAATAACTTACCTTTTAAGTTGACATGTGCAACTACTAGACAAGTTGTTAATGTTGTAACAACAAAGATAGCACTTAAGGGTGGTAAAATTGTTAATAATTGGTTGAAGCAGTTAATTAAAGTTACACTTGTGTTCCTTTTTGTTGCTGCTATTTTCTATTTAATAACACCTGTTCATGTCATGTCTAAACATACTGACTTTTCAAGTGAAATCATAGGATACAAGGCTATTGATGGTGGTGTCACTCGTGACATAGCATCTACAGATACTTGTTTTGCTAACAAACATGCTGATTTTGACACATGGTTTAGCCAGCGTGGTGGTAGTTATACTAATGACAAAGCTTGCCCATTGATTGCTGCAGTCATAACAAGAGAAGTGGGTTTTGTCGTGCCTGGTTTGCCTGGCACGATATTACGCACAACTAATGGTGACTTTTTGCATTTCTTACCTAGAGTTTTTAGTGCAGTTGGTAACATCTGTTACACACCATCAAAACTTATAGAGTACACTGACTTTGCAACATCAGCTTGTGTTTTGGCTGCTGAATGTACAATTTTTAAAGATGCTTCTGGTAAGCCAGTACCATATTGTTATGATACCAATGTACTAGAAGGTTCTGTTGCTTATGAAAGTTTACGCCCTGACACACGTTATGTGCTCATGGATGGCTCTATTATTCAATTTCCTAACACCTACCTTGAAGGTTCTGTTAGAGTGGTAACAACTTTTGATTCTGAGTACTGTAGGCACGGCACTTGTGAAAGATCAGAAGCTGGTGTTTGTGTATCTACTAGTGGTAGATGGGTACTTAACAATGATTATTACAGATCTTTACCAGGAGTTTTCTGTGGTGTAGATGCTGTAAATTTACTTACTAATATGTTTACACCACTAATTCAACCTATTGGTGCTTTGGACATATCAGCATCTATAGTAGCTGGTGGTATTGTAGCTATCGTAGTAACATGCCTTGCCTACTATTTTATGAGGTTTAGAAGAGCTTTTGGTGAATACAGTCATGTAGTTGCCTTTAATACTTTACTATTCCTTATGTCATTCACTGTACTCTGTTTAACACCAGTTTACTCATTCTTACCTGGTGTTTATTCTGTTATTTACTTGTACTTGACATTTTATCTTACTAATGATGTTTCTTTTTTAGCACATATTCAGTGGATGGTTATGTTCACACCTTTAGTACCTTTCTGGATAACAATTGCTTATATCATTTGTATTTCCACAAAGCATTTCTATTGGTTCTTTAGTAATTACCTAAAGAGACGTGTAGTCTTTAATGGTGTTTCCTTTAGTACTTTTGAAGAAGCTGCGCTGTGCACCTTTTTGTTAAATAAAGAAATGTATCTAAAGTTGCGTAGTGATGTGCTATTACCTCTTACGCAATATAATAGATACTTAGCTCTTTATAATAAGTACAAGTATTTTAGTGGAGCAATGGATACAACTAGCTACAGAGAAGCTGCTTGTTGTCATCTCGCAAAGGCTCTCAATGACTTCAGTAACTCAGGT…'
1 IKGLYLPR*Q TNQLSISCRS VL*TNFKICV AVTRLHA*CT HAV*LITNYC R*QDTSNSSI 61 FCRLLTVSSV LQPIISTSRF RPGVTER*DG EPCPWFQREN TRPTQFACFT GSRRARTWLW 121 RLRGGGLIRG TSTS*RWHLW LSRS*KRRFA ST*TALCVHQ TFGCSNCTSW SCYG*AGSRT 181 RRHSVRS*W* DTWCPCPSCG RNTSGLPQGS SS*ER**RSW WP*LRRRSKV I*LRRRAWH* 241 SL*RFSRKLE H*T*QWCYP* THA*A*RRGI HSLCR*QLLW P*WLPS*VH* RPSSTCW*SF 301 MHFVRTTGLY *H*EGCILLP *T*A*NCLVH GTF*KEL*IA DTF*N*IGKE I*HLQWGMSK 361 FCISLKFHNQ DYSTKG*KEK A*WLYG*NSI CLSSCVTK*M QPNVPFNSHE V*SLW*NFMA 421 DGRFC*SHLR ILWH*EFD*R RCHYLWLLTP KCCC*NLLSS MSQFRSRT*A *SCRIP**IW 481 LENHSS*GWS HYCLWRLCVL LCWLP*QVCL LGSTC*R*HR L*PYRCCWRR FRRS**QPS* 541 NTPKRESQHQ YCW*L*T**R DRHYFGIFFC FHKCFCGNCE RFGL*SIQTN C*ILW*F*SY 601 KRKS*KRCLE YW*TEINTES SLCICIRGCS CCTINFLPHS *NCSKFCACF TEGRYNNTRW 661 NFTVFTETH* CYDVHI*FGY *QSSCNGLHY RWCCSVDFAV AN*HLWHCL* KTQTRP*LA* 721 REV*GRCRVS *RRLGNC*IY LNLCL*NCRW TNCHLCKGN* GECSDIL*AC K*IFGFVC*L 781 YHYWWS*T*S LEFR*NICHA LKGIVQKVC* IQRRNWPTHA SKSPKRNYLL RGRNTSHRSV 841 NRGSCLENW* FTTIRTTY** SC*SSIGWYT SLY*RAYVAR NQRHRKVLCP CT*YDGNKQY 901 LHTQRRCTNK GYFW**HCDR SARLQECEYH F*T**KD**S T**EVLCLYS *TRYRSK*VR 961 LCCGRCCHKN FATSI*ITYT TGH*FR*VEY GYILLI**VW *V*IGFTYVL FFLPSR*G*R 1021 RR*L*RRRV* AINSI*VWY* R*LPR*TFGI WCHFCCSST* RRARRRLVR* **STNCWSTR 1081 RQ*GQSDNYY SNNC*GSTSI RDGTYTSCSD Y*SE*F*WLF KTY*QCIH*K CRHCGRS*KG 1141 KTNSGC*CSQ CLP*TWRRCC RSLK*GY*QC HAS*I**LHS Y*WTT*SGW* LCFKRTQSC* 1201 TLSSCCRPKC *QR*RHSTS* ECL*KF*SAR SSTCTIIISW YFWC*PYTFF KSLCRYCSHK 1261 CLLSCL**KS L*QTCFKLFG NEE*KAS*TK DR*DS*RGS* AIYN*K*TFS *TEKTR**EN 1321 QSLC*RSYNN SGRN*VPHRK LVTLY*H*WQ SSSRFCHSC* *H*HHFLKER CSIYSG*CCS 1381 RGCFNCCGYT Y*KGWWHY*N ASESFEKSAN RQLYNHLPGS GFKWLHCRGG KDSA*KV*KC 1441 LLHSTIYYL* *EARNSWNCF LEFARNACTC RRNTQINACL CGN*SHSFNY TA*I*GY*NT 1501 RGCG*LWC*I LLLHQ*NNCS VTYQHT*RSK *NSCYNATWL CNTWLKFGRS CSVYEISQSA 1561 SYSFCFFT*C CYSV*WLSYF FF*NT*RTFY *NHLTCWFL* RLVLFWTIYT TRYRIS*ER* 1621 *KCILH**SY HIPPRW*SYH L*QS*DTSFF ERSEDY*GVY NSRQH*PPHA SCGHVNDIWT 1681 TVWSNLFGWS *CY*NKTS*F T*R*NILCFT ***HSTC*GF *VLPHN*S*F SG*VHVSIKS 1741 H*KVEIPTS* WFNFY*MGR* QLLSCHCIVN TPTNRVEV*S TCSTRCLLQS KGW*SC*LLC 1801 TYLSLL**DS R*VR*C*RNN ELLVSTCQFR FLQKSLERGV *NLWTTADNP *GCRSCYVHG 1861 HTFL*TI*ER CSDTLYVW*T SYKISSTTGV TFCYDVSTTC SV*T*AWYIY LC**VHW*LP 1921 VWSL*TYNF* RNFVLHRRCF TYKVLRIQRS YYGCFLQRKQ LHNNHKTSYL *IGWCCLYRN 1981 *P*VGQLL*E RQFLFHRATN *SCTKPTISK RKLR*F*VCM **YQIC**FK PVNWL*ETCF 2041 KRA*SYIFP* LKW*CGGY*L *TLHTLF*ER S*IVT*TYCL AC*QCN**SH V*TKYLVYTL 2101 SLEHKTS*NI KFV*CTEVRG RAGNG*SCLR RSKTSL*RSS GKSYHTERRS *V*CENYRSC 2161 RRHYT*TSK* *FKNYRRGWP HRSNGCLCRQ F*SYY*ET** II*SIRFENP CYSWFSCC** 2221 CPLGYYS*LC *AFS*QSC*Y NY*HSYTVFK PCLY*LYALF LYFIATIVYF Y*KYKF*N*S 2281 IYADYYSKEY C*ECR*ILSR GFI*LFEVT* FF*TDKYYNL VFTIKCLPRF FNLLNRCFRC 2341 FNV*FRHAFL LYWLQRRLFE LY*CHYCNLL YWFYTL*CLS *WFRFFRHLS FFRNYTNYHF 2401 IF*MGFNCFW LSCRVVFGIY SFH*VFLCTW IGCNHAIVFQ LFCSTFY**F LAYVVNN*SC 2461 TNGPDFSYG* NVHLLCIILL CMEKLCACCR RL*FINLYDV LQT**SNKSR MYNYC*WC*K 2521 VLLCLC*WR* RLLQTTQLEL C*L*YILCW* YIY***SCER LVTTV*KTNK SY*PVFLHR* 2581 *CYSEEWFHP SLL**SWSKD L*KTFSLSFC *LRQPES**H *RFIAY*CYS F*W*IKM*RI 2641 ICKISVCLLQ SAYVSTYTVT RSGISV*CW* *CGSCS*NV* CLR*YVFINF *RTNGKTQNT 2701 SCNCRS*TCK ECVLRQCLIY FYFSSSARVC *FRCRN*RCC *MS*IVTSI* HRSYWR*L** 2761 LYAHL*QS*K HDTP*PWCLY *L*CASY*CA GSKKSQHCFD MER*RFHVIV *TTTKTNT*C 2821 C*KE*LTF*V DMCNY*TSC* CCNNKDST*G W*NC**LVEA VN*SYTCVPF CCCYFLFNNT 2881 CSCHV*TY*L FK*NHRIQGY *WWCHS*HSI YRYLFC*QTC *F*HMV*PAW W*LY**QSLP 2941 IDCCSHNKRS GFCRAWFAWH DITHN*W*LF AFLT*SF*CS W*HLLHTIKT YRVH*LCNIS 3001 LCFGC*MYNF *RCFW*ASTI LL*YQCTRRF CCL*KFTP*H TLCAHGWLYY SIS*HLP*RF 3061 C*SGNNF*F* VL*ARHL*KI RSWCLCIY*W *MGT*Q*LLQ IFTRSFLWCR CCKFTY*YVY 3121 TTNSTYWCFG HISIYSSWWY CSYRSNMPCL LFYEV*KSFW *IQSCSCL*Y FTIPYVIHCT 3181 LFNTSLLILT WCLFCYLLVL DILSY**CFF FSTYSVDGYV HTFSTFLDNN CLYHLYFHKA 3241 FLLVL**LPK ETCSL*WCFL *YF*RSCAVH LFVK*RNVSK VA**CAITSY AI**ILSSL* 3301 *VQVF*WSNG YN*LQRSCLL SSRKGSQ*LQ *LRF*CSLPT TTNLYHLSCF AEWF*KNGIP 3361 IW*S*GLYGT SNLWYNYT*R SLA**RSLLS KTCDLHL*RH A*P*L*RFTH S*V*S*FLGT 3421 GW*CSTQGYW TFYAKLCT*A *G*YSQS*DT *V*VCSHSTR TDFFSVSLLQ WFTIWCLPMC 3481 YEAQFHY*GF IP*WFMW*CW F*HRL*LCLF LLHAPYGITN WSSCWHRLRR *LLWTFC*QA 3541 NSTSSWYGHN YYS*CFSLVV RCCYKWRQVV SQSIYHNS** L*PCGYEVQL *TSNTRPC*H 3601 TRTSFCSNWN CRFRYVCFIK RITAKWYEWT YHIG*CFIRR *IYTF*CC*T MLRCYFPKCS 3661 EKNNQGYTPL VVTHNFDFTF SFSPEYSMVF VLFFV*KCLF TFCYGYYCYV CFCNDVCQT* 3721 ACISLFVFVT FSCHCSLF*Y GLYAC*LGDA YYDMVGYG*Y *FVWF*AKRL CYVCISCSVT 3781 NPYDSKNCV* *WC*ESVDTY ECLDTRL*SL LW*CFRSSHF HVGSYNLCYF *LLRCSYNCH 3841 VFGQRYCFYV C*VLPYFLHN W*YTSVYNAS LLFLRLFLYL LLWPLLFTQP LL*TDSWCL* 3901 LLSFYTGV*I YEFTGTTPTQ E*HRCLQTQH *IVGCWWQTL YQSSHCTV*N VRCKVHISSL 3961 TLSFATTQSR III*IVGSMC PVTQ*HSLS* RYY*SL*KNG FTTFCFAFHA GCCRHKQAL* 4021 RNAGQQGNLT SYSLRV*FPS IICSFCYCSR SL*AGCC*W* F*SCS*KVEE VFECG*I*I* 4081 P*CSHAT*VG KDG*SSYDPN V*TG*I*GQE GKSY*CYADN AFHYA*KVG* *CTQQHYQQC 4141 KRWLCSLEHN TSYNSSQTNG CHTRL*HI*K YV*WYNIYLC ISIVGNPTGC RCR**NCST* 4201 *N*YGQFT*F SMASYCNSFK GQFCCQITE* *A*SCCTTTD VLCCRYYTNC LH**QCVSLL 4261 QHNKGR*VCT CTVIRFTGFE MG*IP*E*WN WYYLYRTGTT L*VCYRHT*R S*SEVFILY* 4321 RIKQPK*RYG TW*FSCHSTS TSW*CNRSAC QFNCIIFLCF CCRCC*SLQR LSS*WGTTNH 4381 *LC*DVVYTH WYWSGNNSYT GSQYGSRILW WCIVLSVLPL PHRSSKS*RI L*LKR*VCTN 4441 TYNLC**PCG FYT*KHSLYR LRYVERLWL* L*STPRTHAS VS*CTIVFKR VCGVSAARLT 4501 PCGTGTSTDV VYRAFDIYND KVAGFAKFLK TNCCRFQEKD EDDNLIDSYF VVKRHTFSNY 4561 QHEETIYNLL KDCPAVAKHD FFKFRIDGDM VPHISRQRLT KYTMADLVYA LRHFDEGNCD 4621 TLKEILVTYN CCDDDYFNKK DWYDFVENPD ILRVYANLGE RVRQALLKTV QFCDAMRNAG 4681 IVGVLTLDNQ DLNGNWYDFG DFIQTTPGSG VPVVDSYYSL LMPILTLTRA LTAESHVDTD 4741 LTKPYIKWDL LKYDFTEERL KLFDRYFKYW DQTYHPNCVN CLDDRCILHC ANFNVLFSTV 4801 FPPTSFGPLV RKIFVDGVPF VVSTGYHFRE LGVVHNQDVN LHSSRLSFKE LLVYAADPAM 4861 HAASGNLLLD KRTTCFSVAA LTNNVAFQTV KPGNFNKDFY DFAVSKGFFK EGSSVELKHF 4921 FFAQDGNAAI SDYDYYRYNL PTMCDIRQLL FVVEVVDKYF DCYDGGCINA NQVIVNNLDK 4981 SAGFPFNKWG KARLYYDSMS YEDQDALFAY TKRNVIPTIT QMNLKYAISA KNRARTVAGV 5041 SICSTMTNRQ FHQKLLKSIA ATRGATVVIG TSKFYGGWHN MLKTVYSDVE NPHLMGWDYP 5101 KCDRAMPNML RIMASLVLAR KHTTCCSLSH RFYRLANECA QVLSEMVMCG GSLYVKPGGT 5161 SSGDATTAYA NSVFNICQAV TANVNALLST DGNKIADKYV RNLQHRLYEC LYRNRDVDTD 5221 FVNEFYAYLR KHFSMMILSD DAVVCFNSTY ASQGLVASIK NFKSVLYYQN NVFMSEAKCW 5281 TETDLTKGPH EFCSQHTMLV KQGDDYVYLP YPDPSRILGA GCFVDDIVKT DGTLMIERFV 5341 SLAIDAYPLT KHPNQEYADV FHLYLQYIRK LHDELTGHML DMYSVMLTND NTSRYWEPEF 5401 YEAMYTPHTV LQAVGACVLC NSQTSLRCGA CIRRPFLCCK CCYDHVISTS HKLVLSVNPY 5461 VCNAPGCDVT DVTQLYLGGM SYYCKSHKPP ISFPLCANGQ VFGLYKNTCV GSDNVTDFNA 5521 IATCDWTNAG DYILANTCTE RLKLFAAETL KATEETFKLS YGIATVREVL SDRELHLSWE 5581 VGKPRPPLNR NYVFTGYRVT KNSKVQIGEY TFEKGDYGDA VVYRGTTTYK LNVGDYFVLT 5641 SHTVMPLSAP TLVPQEHYVR ITGLYPTLNI SDEFSSNVAN YQKVGMQKYS TLQGPPGTGK 5701 SHFAIGLALY YPSARIVYTA CSHAAVDALC EKALKYLPID KCSRIIPARA RVECFDKFKV 5761 NSTLEQYVFC TVNALPETTA DIVVFDEISM ATNYDLSVVN ARLRAKHYVY IGDPAQLPAP 5821 RTLLTKGTLE PEYFNSVCRL MKTIGPDMFL GTCRRCPAEI VDTVSALVYD NKLKAHKDKS 5881 AQCFKMFYKG VITHDVSSAI NRPQIGVVRE FLTRNPAWRK AVFISPYNSQ NAVASKILGL 5941 PTQTVDSSQG SEYDYVIFTQ TTETAHSCNV NRFNVAITRA KVGILCIMSD RDLYDKLQFT 6001 SLEIPRRNVA TLQAENVTGL FKDCSKVITG LHPTQAPTHL SVDTKFKTEG LCVDIPGIPK 6061 DMTYRRLISM MGFKMNYQVN GYPNMFITRE EAIRHVRAWI GFDVEGCHAT REAVGTNLPL 6121 QLGFSTGVNL VAVPTGYVDT PNNTDFSRVS AKPPPGDQFK HLIPLMYKGL PWNVVRIKIV 6181 QMLSDTLKNL SDRVVFVLWA HGFELTSMKY FVKIGPERTC CLCDRRATCF STASDTYACW 6241 HHSIGFDYVY NPFMIDVQQW GFTGNLQSNH DLYCQVHGNA HVASCDAIMT RCLAVHECFV 6301 KRVDWTIEYP IIGDELKINA ACRKVQHMVV KAALLADKFP VLHDIGNPKA IKCVPQADVE 6361 WKFYDAQPCS DKAYKIEELF YSYATHSDKF TDGVCLFWNC NVDRYPANSI VCRFDTRVLS 6421 NLNLPGCDGG SLYVNKHAFH TPAFDKSAFV NLKQLPFFYY SDSPCESHGK QVVSDIDYVP 6481 LKSATCITRC NLGGAVCRHH ANEYRLYLDA YNMMISAGFS LWVYKQFDTY NLWNTFTRLQ 6541 SLENVAFNVV NKGHFDGQQG EVPVSIINNT VYTKVDGVDV ELFENKTTLP VNVAFELWAK 6601 RNIKPVPEVK ILNNLGVDIA ANTVIWDYKR DAPAHISTIG VCSMTDIAKK PTETICAPLT 6661 VFFDGRVDGQ VDLFRNARNG VLITEGSVKG LQPSVGPKQA SLNGVTLIGE AVKTQFNYYK 6721 KVDGVVQQLP ETYFTQSRNL QEFKPRSQME IDFLELAMDE FIERYKLEGY AFEHIVYGDF 6781 SHSQLGGLHL LIGLAKRFKE SPFELEDFIP MDSTVKNYFI TDAQTGSSKC VCSVIDLLLD 6841 DFVEIIKSQD LSVVSKVVKV TIDYTEISFM LWCKDGHVET FYPKLQSSQA WQPGVAMPNL 6901 YKMQRMLLEK CDLQNYGDSA TLPKGIMMNV AKYTQLCQYL NTLTLAVPYN MRVIHFGAGS 6961 DKGVAPGTAV LRQWLPTGTL LVDSDLNDFV SDADSTLIGD CATVHTANKW DLIISDMYDP 7021 KTKNVTKEND SKEGFFTYIC GFIQQKLALG GSVAIKITEH SWNADLYKLM GHFAWWTAFV 7081 TNVNASSSEA FLIGCNYLGK PREQIDGYVM HANYIFWRNT NPIQLSSYSL FDMSKFPLKL 7141 RGTAVMSLKE GQINDMILSL LSKGRLIIRE NNRVVISSDV LVNN*TNNVC FSCFIATSL* 7201 SVC*SYNQNS ITPCIH*FFH TWCLLP*QSF QILSFTFNSG LVLTFLFQCY LVPCYTCLWD 7261 QWY*EV**PC PTI**WCLFC FH*EV*HNKR LDFWYYFRFE DPVPTYC**R Y*CCY*SL*I 7321 SIL**SIFGC LLPQKQQKLD GK*VQSLF*C E*LHF*ICLS AFSYGP*RKT G*FQKS*GIC 7381 V*EY*WLF*N IF*AHAY*FS A*SPSGFFGF RTIGRFANRY *HH*VSNFTC FT*KLFDSW* 7441 FFFRLDSWCC SLLCGLSST* DFSIKI**KW NHYRCCRLCT *PSLRNKVYV EILHCRKRNL 7501 SNF*L*SPTN RIYC*IS*YY KLVPFW*SF* RHQICICLCL EQEENQQLCC *LFCPI*FRI 7561 IFHF*VLWSV SY*IK*SLLY *CLCRFICN* R**SQTNRSR ANWKDC*L*L *ITR*FYRLR 7621 YSLEF*QS*F *GWW*L*LPV *IV*EV*SQT F*ERYFN*NL SGR*HTL*WC *RF*LLLSFT 7681 IIWFPTH*WC WLPTIQSSST FF*TSTCTSN CLWT*KVY*F G*KQMCQFQL QWFNRHRCSY 7741 *V*QKVSAFP TIWQRHC*HY *CCP*STDT* DS*HYTMFFW WCQCYNTRNK YF*PGCCSLS 7801 GC*LHRSPCC YSCRSTYSYL ACLFYRF*CF SNTCRLFNRG *TCQQLI*V* HTHWCRYMR* 7861 LSDSD*FSSA GT*CS*SIHH CLHYVTWCRK FSCLL**LYC HTHKFYY*CY HRNSTSVYDQ 7921 DISRLYNVHL W*FN*MQQSF VAIWQFLYTI KPCFNWNSC* TRQKHPRSFC TSQTNLQNTT 7981 N*RFWWF*FF TNITRSIKTK QEVIY*RSTF QQSDTCRCWL HQTIW*LPW* YCC*RPHLCT 8041 KV*RPYCFAT FAHR*NDCSI HFCTVSGYNH FWLDLWCRCC ITNTICYANG L*V*WYWSYT 8101 ECSL*EPKID CQPI**CYWQ NSRLTFFHSK CTWKTSRCGQ PKCTSFKHAC *TT*LQFWCN 8161 FKCFK*YPFT S*QS*G*SAN **VDHRQTSK FADICDSTIN *SCRNQSFC* SCCY*NVRVC 8221 TWTIKKS*FL WKGLSSYVLP SVSTSWCSLL ACDLCPCTRK ELHNCSCHLS *WKSTLSS*R 8281 CLCFKWHTLV CNTKEFL*TT NHYYRQHICV W*L*CCNRNC QQHSL*SFAT *IRLIQGGVR 8341 *IF*ESYITR C*FR*HLWH* CFSCKHSKRN *PPQ*GCQEF K*ISHRSPRT WKV*AVYKMA 8401 MVHLARFYSW LDCHSNGDNY ALLYDQLL*L SQGLLFLWIL LQI**RRL*A SAQRSQITLH 8461 INELMDLFMR IFTIGTVTLK QGEIKDATPS DFVRATATIP IQASLPFGWL IVGVALLAVF 8521 QSASKIITLK KRWQLALSKG VHFVCNLLLL FVTVYSHLLL VAAGLEAPFL YLYALVYFLQ 8581 SINFVRIIMR LWLCWKCRSK NPLLYDANYF LCWHTNCYDY CIPYNSVTSS IVITSGDGTT 8641 SPISEHDYQI GGYTEKWESG VKDCVVLHSY FTSDYYQLYS TQLSTDTGVE HVTFFIYNKI 8701 VDEPEEHVQI HTIDGSSGVV NPVMEPIYDE PTTTTSVPL* AQADEYELMY SFVSEETGTL 8761 IVNSVLLFLA FVVFLLVTLA ILTALRLCAY CCNIVNVSLV KPSFYVYSRV KNLNSSRVPD 8821 LLV*TN*ILY *FFCLEL*F* PWQIPTVLLP LKSLKSSLNN GT***VSYSL HGFVFYNLPM 8881 PTGIGFCI*L S*FSSGCYGQ *L*LVLCLLL FTE*IGSPVE LLSQWLVL*A *CGSATSLLL 8941 SDCLRVRVPC GHSIQKLTFF STCHSMALF* PDRF*KVNS* SEL*SFVDIF VLLDTI*DAV 9001 TSRTCLKKSL LLHHERFLIT NWELRSV*QV TQVLLHTVAT GLATIN*TQT IPVAVTILLC 9061 LYSK*QQMFH LVDFQVTIAE ILLIIMRTFK VSIWNLDYII NLIIKNLSKS LTENKYSQLD 9121 EEQPMEID*T NMKIILFLAL ITLATCELYH YQECVRGTTV LLKEPCSSGT YEGNSPFHPL 9181 ADNKFALTCF STQFAFACPD GVKHVYQLRA RSVSPKLFIR QEEVQELYSP IFLIVAAIVF 9241 ITLCFTLKRK TE*LNFH*LT SICAF*PFCY SLF*LCLLSF GSHLNCKIIM KLVTPKRT*N 9301 FLFS*ESSQL *LHFTKNVVY SHVLNINHM* LMTRVLFTSI LNGILE*ELE NQHL*LNCAW 9361 MRLVLNHPFS TSISVIIQFP VYLLQLIARN LNWVVL*CVV RSMKTF*SIM TFVLF*ISSK 9421 RTN*NV**WT PKSAKCTPHY VWWTLRFNWQ *PEWRTQWGA IKTTSAPRFT Q*YCVLVHRS 9481 HSTWQGRP*I PSRTRRSN*H Q*QSR*PNWL LPKSYQTNSW W*R*NERSQS KMVFLLPRNW 9541 ARSWTSLWC* QRRHHMGCN* GSLEYTKRSH WHPQSC*QCC NRATTSSRNN IAKRLLRRRE 9601 QRRQSSLFSF LIT*SQQFKK FNSRQQ*GNF SC*NGWQWR* CCSCFAAA*Q IEPA*EQNVW 9661 *RPTTTRPNC H*EICC*GF* EASAKTYCH* SIQCNTSFRQ TWSRTNPRKF WGPGTNQTRN 9721 *LQTLAANCT ICPQRFSVLR NVAHWHGSHT FGNVVDLHRC HQIG*QRSKF QRSSHFAE*A 9781 Y*RIQNIPTN RA*KGQKEEG **NSSLTAET EETANCDSSS CCRFG*FLQT IATIHEQC*L 9841 NSGLNSCRPH KADGLYKRFR FSVYDI*STL VQNEFS*LHS TSRCS*L*SH IAIFNQCVTL 9901 GRT*KSHHIF TEATRSTIEC TVNNARESCL YGRALMCKIN FSSAIPM*F* *LLRRMTKKK 9961 KKKKKKK
codons = struct with fields: AAA: 303 AAC: 212 AAG: 110 AAT: 260 ACA: 249 ACC: 150 ACG: 60 ACT: 220 AGA: 277 AGC: 141 AGG: 123 AGT: 197 ATA: 116 ATC: 112 ATG: 117 ATT: 208 CAA: 233 CAC: 160 CAG: 92 CAT: 172 CCA: 115 CCC: 42 CCG: 28 CCT: 107 CGA: 31 CGC: 40 CGG: 33 CGT: 54 CTA: 110 CTC: 78 CTG: 80 CTT: 208 GAA: 186 GAC: 123 GAG: 84 GAT: 167 GCA: 116 GCC: 68 GCG: 22 GCT: 169 GGA: 112 GGC: 84 GGG: 49 GGT: 149 GTA: 121 GTC: 101 GTG: 93 GTT: 233 TAA: 342 TAC: 227 TAG: 128 TAT: 278 TCA: 173 TCC: 75 TCG: 34 TCT: 190 TGA: 304 TGC: 268 TGG: 263 TGT: 367 TTA: 232 TTC: 210 TTG: 178 TTT: 383
TTT_aa = 'Phe Phenylalanine '
TGT_aa = 'Cys Cysteine '
TAA_aa = 'END Termination codon '
CVSeq = 'IKGLYLPR*QTNQLSISCRSVL*TNFKICVAVTRLHA*CTHAV*LITNYCR*QDTSNSSIFCRLLTVSSVLQPIISTSRFRPGVTER*DGEPCPWFQRENTRPTQFACFTGSRRARTWLWRLRGGGLIRGTSTS*RWHLWLSRS*KRRFAST*TALCVHQTFGCSNCTSWSCYG*AGSRTRRHSVRS*W*DTWCPCPSCGRNTSGLPQGSSS*ER**RSWWP*LRRRSKVI*LRRRAWH*SL*RFSRKLEH*T*QWCYP*THA*A*RRGIHSLCR*QLLWP*WLPS*VH*RPSSTCW*SFMHFVRTTGLY*H*EGCILLP*T*A*NCLVHGTF*KEL*IADTF*N*IGKEI*HLQWGMSKFCISLKFHNQDYSTKG*KEKA*WLYG*NSICLSSCVTK*MQPNVPFNSHEV*SLW*NFMADGRFC*SHLRILWH*EFD*RRCHYLWLLTPKCCC*NLLSSMSQFRSRT*A*SCRIP**IWLENHSS*GWSHYCLWRLCVLLCWLP*QVCLLGSTC*R*HRL*PYRCCWRRFRRS**QPS*NTPKRESQHQYCW*L*T**RDRHYFGIFFCFHKCFCGNCERFGL*SIQTNC*ILW*F*SYKRKS*KRCLEYW*TEINTESSLCICIRGCSCCTINFLPHS*NCSKFCACFTEGRYNNTRWNFTVFTETH*CYDVHI*FGY*QSSCNGLHYRWCCSVDFAVAN*HLWHCL*KTQTRP*LA*REV*GRCRVS*RRLGNC*IYLNLCL*NCRWTNCHLCKGN*GECSDIL*ACK*IFGFVC*LYHYWWS*T*SLEFR*NICHALKGIVQKVC*IQRRNWPTHASKSPKRNYLLRGRNTSHRSVNRGSCLENW*FTTIRTTY**SC*SSIGWYTSLY*RAYVARNQRHRKVLCPCT*YDGNKQYLHTQRRCTNKGYFW**HCDRSARLQECEYHF*T**KD**ST**EVLCLYS*TRYRSK*VRLCCGRCCHKNFATSI*ITYTTGH*FR*VEYGYILLI**VW*V*IGFTYVLFFLPSR*G*RRR*L*RRRV*AINSI*VWY*R*LPR*TFGIWCHFCCSST*RRARRRLVR***STNCWSTRRQ*GQSDNYYSNNC*GSTSIRDGTYTSCSDY*SE*F*WLFKTY*QCIH*KCRHCGRS*KGKTNSGC*CSQCLP*TWRRCCRSLK*GY*QCHAS*I**LHSY*WTT*SGW*LCFKRTQSC*TLSSCCRPKC*QR*RHSTS*ECL*KF*SARSSTCTIIISWYFWC*PYTFFKSLCRYCSHKCLLSCL**KSL*QTCFKLFGNEE*KAS*TKDR*DS*RGS*AIYN*K*TFS*TEKTR**ENQSLC*RSYNNSGRN*VPHRKLVTLY*H*WQSSSRFCHSC**H*HHFLKERCSIYSG*CCSRGCFNCCGYTY*KGWWHY*NASESFEKSANRQLYNHLPGSGFKWLHCRGGKDSA*KV*KCLLHSTIYYL**EARNSWNCFLEFARNACTCRRNTQINACLCGN*SHSFNYTA*I*GY*NTRGCG*LWC*ILLLHQ*NNCSVTYQHT*RSK*NSCYNATWLCNTWLKFGRSCSVYEISQSASYSFCFFT*CCYSV*WLSYFFF*NT*RTFY*NHLTCWFL*RLVLFWTIYTTRYRIS*ER**KCILH**SYHIPPRW*SYHL*QS*DTSFFERSEDY*GVYNSRQH*PPHASCGHVNDIWTTVWSNLFGWS*CY*NKTS*FT*R*NILCFT***HSTC*GF*VLPHN*S*FSG*VHVSIKSH*KVEIPTS*WFNFY*MGR*QLLSCHCIVNTPTNRVEV*STCSTRCLLQSKGW*SC*LLCTYLSLL**DSR*VR*C*RNNELLVSTCQFRFLQKSLERGV*NLWTTADNP*GCRSCYVHGHTFL*TI*ERCSDTLYVW*TSYKISSTTGVTFCYDVSTTCSV*T*AWYIYLC**VHW*LPVWSL*TYNF*RNFVLHRRCFTYKVLRIQRSYYGCFLQRKQLHNNHKTSYL*IGWCCLYRN*P*VGQLL*ERQFLFHRATN*SCTKPTISKRKLR*F*VCM**YQIC**FKPVNWL*ETCFKRA*SYIFP*LKW*CGGY*L*TLHTLF*ERS*IVT*TYCLAC*QCN**SHV*TKYLVYTLSLEHKTS*NIKFV*CTEVRGRAGNG*SCLRRSKTSL*RSSGKSYHTERRS*V*CENYRSCRRHYT*TSK**FKNYRRGWPHRSNGCLCRQF*SYY*ET**II*SIRFENPCYSWFSCC**CPLGYYS*LC*AFS*QSC*YNY*HSYTVFKPCLY*LYALFLYFIATIVYFY*KYKF*N*SIYADYYSKEYC*ECR*ILSRGFI*LFEVT*FF*TDKYYNLVFTIKCLPRFFNLLNRCFRCFNV*FRHAFLLYWLQRRLFELY*CHYCNLLYWFYTL*CLS*WFRFFRHLSFFRNYTNYHFIF*MGFNCFWLSCRVVFGIYSFH*VFLCTWIGCNHAIVFQLFCSTFY**FLAYVVNN*SCTNGPDFSYG*NVHLLCIILLCMEKLCACCRRL*FINLYDVLQT**SNKSRMYNYC*WC*KVLLCLC*WR*RLLQTTQLELC*L*YILCW*YIY***SCERLVTTV*KTNKSY*PVFLHR**CYSEEWFHPSLL**SWSKDL*KTFSLSFC*LRQPES**H*RFIAY*CYSF*W*IKM*RIICKISVCLLQSAYVSTYTVTRSGISV*CW**CGSCS*NV*CLR*YVFINF*RTNGKTQNTSCNCRS*TCKECVLRQCLIYFYFSSSARVC*FRCRN*RCC*MS*IVTSI*HRSYWR*L**LYAHL*QS*KHDTP*PWCLY*L*CASY*CAGSKKSQHCFDMER*RFHVIV*TTTKTNT*CC*KE*LTF*VDMCNY*TSC*CCNNKDST*GW*NC**LVEAVN*SYTCVPFCCCYFLFNNTCSCHV*TY*LFK*NHRIQGY*WWCHS*HSIYRYLFC*QTC*F*HMV*PAWW*LY**QSLPIDCCSHNKRSGFCRAWFAWHDITHN*W*LFAFLT*SF*CSW*HLLHTIKTYRVH*LCNISLCFGC*MYNF*RCFW*ASTILL*YQCTRRFCCL*KFTP*HTLCAHGWLYYSIS*HLP*RFC*SGNNF*F*VL*ARHL*KIRSWCLCIY*W*MGT*Q*LLQIFTRSFLWCRCCKFTY*YVYTTNSTYWCFGHISIYSSWWYCSYRSNMPCLLFYEV*KSFW*IQSCSCL*YFTIPYVIHCTLFNTSLLILTWCLFCYLLVLDILSY**CFFFSTYSVDGYVHTFSTFLDNNCLYHLYFHKAFLLVL**LPKETCSL*WCFL*YF*RSCAVHLFVK*RNVSKVA**CAITSYAI**ILSSL**VQVF*WSNGYN*LQRSCLLSSRKGSQ*LQ*LRF*CSLPTTTNLYHLSCFAEWF*KNGIPIW*S*GLYGTSNLWYNYT*RSLA**RSLLSKTCDLHL*RHA*P*L*RFTHS*V*S*FLGTGW*CSTQGYWTFYAKLCT*A*G*YSQS*DT*V*VCSHSTRTDFFSVSLLQWFTIWCLPMCYEAQFHY*GFIP*WFMW*CWF*HRL*LCLFLLHAPYGITNWSSCWHRLRR*LLWTFC*QANSTSSWYGHNYYS*CFSLVVRCCYKWRQVVSQSIYHNS**L*PCGYEVQL*TSNTRPC*HTRTSFCSNWNCRFRYVCFIKRITAKWYEWTYHIG*CFIRR*IYTF*CC*TMLRCYFPKCSEKNNQGYTPLVVTHNFDFTFSFSPEYSMVFVLFFV*KCLFTFCYGYYCYVCFCNDVCQT*ACISLFVFVTFSCHCSLF*YGLYAC*LGDAYYDMVGYG*Y*FVWF*AKRLCYVCISCSVTNPYDSKNCV**WC*ESVDTYECLDTRL*SLLW*CFRSSHFHVGSYNLCYF*LLRCSYNCHVFGQRYCFYVC*VLPYFLHNW*YTSVYNASLLFLRLFLYLLLWPLLFTQPLL*TDSWCL*LLSFYTGV*IYEFTGTTPTQE*HRCLQTQH*IVGCWWQTLYQSSHCTV*NVRCKVHISSLTLSFATTQSRIII*IVGSMCPVTQ*HSLS*RYY*SL*KNGFTTFCFAFHAGCCRHKQAL*RNAGQQGNLTSYSLRV*FPSIICSFCYCSRSL*AGCC*W*F*SCS*KVEEVFECG*I*I*P*CSHAT*VGKDG*SSYDPNV*TG*I*GQEGKSY*CYADNAFHYA*KVG**CTQQHYQQCKRWLCSLEHNTSYNSSQTNGCHTRL*HI*KYV*WYNIYLCISIVGNPTGCRCR**NCST**N*YGQFT*FSMASYCNSFKGQFCCQITE**A*SCCTTTDVLCCRYYTNCLH**QCVSLLQHNKGR*VCTCTVIRFTGFEMG*IP*E*WNWYYLYRTGTTL*VCYRHT*RS*SEVFILY*RIKQPK*RYGTW*FSCHSTSTSW*CNRSACQFNCIIFLCFCCRCC*SLQRLSS*WGTTNH*LC*DVVYTHWYWSGNNSYTGSQYGSRILWWCIVLSVLPLPHRSSKS*RIL*LKR*VCTNTYNLC**PCGFYT*KHSLYRLRYVERLWL*L*STPRTHASVS*CTIVFKRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQAVGACVLCNSQTSLRCGACIRRPFLCCKCCYDHVISTSHKLVLSVNPYVCNAPGCDVTDVTQLYLGGMSYYCKSHKPPISFPLCANGQVFGLYKNTCVGSDNVTDFNAIATCDWTNAGDYILANTCTERLKLFAAETLKATEETFKLSYGIATVREVLSDRELHLSWEVGKPRPPLNRNYVFTGYRVTKNSKVQIGEYTFEKGDYGDAVVYRGTTTYKLNVGDYFVLTSHTVMPLSAPTLVPQEHYVRITGLYPTLNISDEFSSNVANYQKVGMQKYSTLQGPPGTGKSHFAIGLALYYPSARIVYTACSHAAVDALCEKALKYLPIDKCSRIIPARARVECFDKFKVNSTLEQYVFCTVNALPETTADIVVFDEISMATNYDLSVVNARLRAKHYVYIGDPAQLPAPRTLLTKGTLEPEYFNSVCRLMKTIGPDMFLGTCRRCPAEIVDTVSALVYDNKLKAHKDKSAQCFKMFYKGVITHDVSSAINRPQIGVVREFLTRNPAWRKAVFISPYNSQNAVASKILGLPTQTVDSSQGSEYDYVIFTQTTETAHSCNVNRFNVAITRAKVGILCIMSDRDLYDKLQFTSLEIPRRNVATLQAENVTGLFKDCSKVITGLHPTQAPTHLSVDTKFKTEGLCVDIPGIPKDMTYRRLISMMGFKMNYQVNGYPNMFITREEAIRHVRAWIGFDVEGCHATREAVGTNLPLQLGFSTGVNLVAVPTGYVDTPNNTDFSRVSAKPPPGDQFKHLIPLMYKGLPWNVVRIKIVQMLSDTLKNLSDRVVFVLWAHGFELTSMKYFVKIGPERTCCLCDRRATCFSTASDTYACWHHSIGFDYVYNPFMIDVQQWGFTGNLQSNHDLYCQVHGNAHVASCDAIMTRCLAVHECFVKRVDWTIEYPIIGDELKINAACRKVQHMVVKAALLADKFPVLHDIGNPKAIKCVPQADVEWKFYDAQPCSDKAYKIEELFYSYATHSDKFTDGVCLFWNCNVDRYPANSIVCRFDTRVLSNLNLPGCDGGSLYVNKHAFHTPAFDKSAFVNLKQLPFFYYSDSPCESHGKQVVSDIDYVPLKSATCITRCNLGGAVCRHHANEYRLYLDAYNMMISAGFSLWVYKQFDTYNLWNTFTRLQSLENVAFNVVNKGHFDGQQGEVPVSIINNTVYTKVDGVDVELFENKTTLPVNVAFELWAKRNIKPVPEVKILNNLGVDIAANTVIWDYKRDAPAHISTIGVCSMTDIAKKPTETICAPLTVFFDGRVDGQVDLFRNARNGVLITEGSVKGLQPSVGPKQASLNGVTLIGEAVKTQFNYYKKVDGVVQQLPETYFTQSRNLQEFKPRSQMEIDFLELAMDEFIERYKLEGYAFEHIVYGDFSHSQLGGLHLLIGLAKRFKESPFELEDFIPMDSTVKNYFITDAQTGSSKCVCSVIDLLLDDFVEIIKSQDLSVVSKVVKVTIDYTEISFMLWCKDGHVETFYPKLQSSQAWQPGVAMPNLYKMQRMLLEKCDLQNYGDSATLPKGIMMNVAKYTQLCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGTAVLRQWLPTGTLLVDSDLNDFVSDADSTLIGDCATVHTANKWDLIISDMYDPKTKNVTKENDSKEGFFTYICGFIQQKLALGGSVAIKITEHSWNADLYKLMGHFAWWTAFVTNVNASSSEAFLIGCNYLGKPREQIDGYVMHANYIFWRNTNPIQLSSYSLFDMSKFPLKLRGTAVMSLKEGQINDMILSLLSKGRLIIRENNRVVISSDVLVNN*TNNVCFSCFIATSL*SVC*SYNQNSITPCIH*FFHTWCLLP*QSFQILSFTFNSGLVLTFLFQCYLVPCYTCLWDQWY*EV**PCPTI**WCLFCFH*EV*HNKRLDFWYYFRFEDPVPTYC**RY*CCY*SL*ISIL**SIFGCLLPQKQQKLDGK*VQSLF*CE*LHF*ICLSAFSYGP*RKTG*FQKS*GICV*EY*WLF*NIF*AHAY*FSA*SPSGFFGFRTIGRFANRY*HH*VSNFTCFT*KLFDSW*FFFRLDSWCCSLLCGLSST*DFSIKI**KWNHYRCCRLCT*PSLRNKVYVEILHCRKRNLSNF*L*SPTNRIYC*IS*YYKLVPFW*SF*RHQICICLCLEQEENQQLCC*LFCPI*FRIIFHF*VLWSVSY*IK*SLLY*CLCRFICN*R**SQTNRSRANWKDC*L*L*ITR*FYRLRYSLEF*QS*F*GWW*L*LPV*IV*EV*SQTF*ERYFN*NLSGR*HTL*WC*RF*LLLSFTIIWFPTH*WCWLPTIQSSSTFF*TSTCTSNCLWT*KVY*FG*KQMCQFQLQWFNRHRCSY*V*QKVSAFPTIWQRHC*HY*CCP*STDT*DS*HYTMFFWWCQCYNTRNKYF*PGCCSLSGC*LHRSPCCYSCRSTYSYLACLFYRF*CFSNTCRLFNRG*TCQQLI*V*HTHWCRYMR*LSDSD*FSSAGT*CS*SIHHCLHYVTWCRKFSCLL**LYCHTHKFYY*CYHRNSTSVYDQDISRLYNVHLW*FN*MQQSFVAIWQFLYTIKPCFNWNSC*TRQKHPRSFCTSQTNLQNTTN*RFWWF*FFTNITRSIKTKQEVIY*RSTFQQSDTCRCWLHQTIW*LPW*YCC*RPHLCTKV*RPYCFATFAHR*NDCSIHFCTVSGYNHFWLDLWCRCCITNTICYANGL*V*WYWSYTECSL*EPKIDCQPI**CYWQNSRLTFFHSKCTWKTSRCGQPKCTSFKHAC*TT*LQFWCNFKCFK*YPFTS*QS*G*SAN**VDHRQTSKFADICDSTIN*SCRNQSFC*SCCY*NVRVCTWTIKKS*FLWKGLSSYVLPSVSTSWCSLLACDLCPCTRKELHNCSCHLS*WKSTLSS*RCLCFKWHTLVCNTKEFL*TTNHYYRQHICVW*L*CCNRNCQQHSL*SFAT*IRLIQGGVR*IF*ESYITRC*FR*HLWH*CFSCKHSKRN*PPQ*GCQEFK*ISHRSPRTWKV*AVYKMAMVHLARFYSWLDCHSNGDNYALLYDQLL*LSQGLLFLWILLQI**RRL*ASAQRSQITLHINELMDLFMRIFTIGTVTLKQGEIKDATPSDFVRATATIPIQASLPFGWLIVGVALLAVFQSASKIITLKKRWQLALSKGVHFVCNLLLLFVTVYSHLLLVAAGLEAPFLYLYALVYFLQSINFVRIIMRLWLCWKCRSKNPLLYDANYFLCWHTNCYDYCIPYNSVTSSIVITSGDGTTSPISEHDYQIGGYTEKWESGVKDCVVLHSYFTSDYYQLYSTQLSTDTGVEHVTFFIYNKIVDEPEEHVQIHTIDGSSGVVNPVMEPIYDEPTTTTSVPL*AQADEYELMYSFVSEETGTLIVNSVLLFLAFVVFLLVTLAILTALRLCAYCCNIVNVSLVKPSFYVYSRVKNLNSSRVPDLLV*TN*ILY*FFCLEL*F*PWQIPTVLLPLKSLKSSLNNGT***VSYSLHGFVFYNLPMPTGIGFCI*LS*FSSGCYGQ*L*LVLCLLLFTE*IGSPVELLSQWLVL*A*CGSATSLLLSDCLRVRVPCGHSIQKLTFFSTCHSMALF*PDRF*KVNS*SEL*SFVDIFVLLDTI*DAVTSRTCLKKSLLLHHERFLITNWELRSV*QVTQVLLHTVATGLATIN*TQTIPVAVTILLCLYSK*QQMFHLVDFQVTIAEILLIIMRTFKVSIWNLDYIINLIIKNLSKSLTENKYSQLDEEQPMEID*TNMKIILFLALITLATCELYHYQECVRGTTVLLKEPCSSGTYEGNSPFHPLADNKFALTCFSTQFAFACPDGVKHVYQLRARSVSPKLFIRQEEVQELYSPIFLIVAAIVFITLCFTLKRKTE*LNFH*LTSICAF*PFCYSLF*LCLLSFGSHLNCKIIMKLVTPKRT*NFLFS*ESSQL*LHFTKNVVYSHVLNINHM*LMTRVLFTSILNGILE*ELENQHL*LNCAWMRLVLNHPFSTSISVIIQFPVYLLQLIARNLNWVVL*CVVRSMKTF*SIMTFVLF*ISSKRTN*NV**WTPKSAKCTPHYVWWTLRFNWQ*PEWRTQWGAIKTTSAPRFTQ*YCVLVHRSHSTWQGRP*IPSRTRRSN*HQ*QSR*PNWLLPKSYQTNSWW*R*NERSQSKMVFLLPRNWARSWTSLWC*QRRHHMGCN*GSLEYTKRSHWHPQSC*QCCNRATTSSRNNIAKRLLRRREQRRQSSLFSFLIT*SQQFKKFNSRQQ*GNFSC*NGWQWR*CCSCFAAA*QIEPA*EQNVW*RPTTTRPNCH*EICC*GF*EASAKTYCH*SIQCNTSFRQTWSRTNPRKFWGPGTNQTRN*LQTLAANCTICPQRFSVLRNVAHWHGSHTFGNVVDLHRCHQIG*QRSKFQRSSHFAE*AY*RIQNIPTNRA*KGQKEEG**NSSLTAETEETANCDSSSCCRFG*FLQTIATIHEQC*LNSGLNSCRPHKADGLYKRFRFSVYDI*STLVQNEFS*LHSTSRCS*L*SHIAIFNQCVTLGRT*KSHHIFTEATRSTIECTVNNARESCLYGRALMCKINFSSAIPM*F**LLRRMTKKKKKKKKKK'
CVprotein = 'MESLVPGFNEKTHVQLSLPVLQVRDVLVRGFGDSVEEVLSEARQHLKDGTCGLVEVEKGVLPQLEQPYVFIKRSDARTAPHGHVMVELVAELEGIQYGRSGETLGVLVPHVGEIPVAYRKVLLRKNGNKGAGGHSYGADLKSFDLGDELGTDPYEDFQENWNTKHSSGVTRELMRELNGGAYTRYVDNNFCGPDGYPLECIKDLLARAGKASCTLSEQLDFIDTKRGVYCCREHEHEIAWYTERSEKSYELQTPFEIKLAKKFDTFNGECPNFVFPLNSIIKTIQPRVEKKKLDGFMGRIRSVYPVASPNECNQMCLSTLMKCDHCGETSWQTGDFVKATCEFCGTENLTKEGATTCGYLPQNAVVKIYCPACHNSEVGPEHSLAEYHNESGLKTILRKGGRTIAFGGCVFSYVGCHNKCAYWVPRASANIGCNHTGVVGEGSEGLNDNLLEILQKEKVNINIVGDFKLNEEIAIILASFSASTSAFVETVKGLDYKAFKQIVESCGNFKVTKGKAKKGAWNIGEQKSILSPLYAFASEAARVVRSIFSRTLETAQNSVRVLQKAAITILDGISQYSLRLIDAMMFTSDLATNNLVVMAYITGGVVQLTSQWLTNIFGTVYEKLKPVLDWLEEKFKEGVEFLRDGWEIVKFISTCACEIVGGQIVTCAKEIKESVQTFFKLVNKFLALCADSIIIGGAKLKALNLGETFVTHSKGLYRKCVKSREETGLLMPLKAPKEIIFLEGETLPTEVLTEEVVLKTGDLQPLEQPTSEAVEAPLVGTPVCINGLMLLEIKDTEKYCALAPNMMVTNNTFTLKGGAPTKVTFGDDTVIEVQGYKSVNITFELDERIDKVLNEKCSAYTVELGTEVNEFACVVADAVIKTLQPVSELLTPLGIDLDEWSMATYYLFDESGEFKLASHMYCSFYPPDEDEEEGDCEEEEFEPSTQYEYGTEDDYQGKPLEFGATSAALQPEEEQEEDWLDDDSQQTVGQQDGSEDNQTTTIQTIVEVQPQLEMELTPVVQTIEVNSFSGYLKLTDNVYIKNADIVEEAKKVKPTVVVNAANVYLKHGGGVAGALNKATNNAMQVESDDYIATNGPLKVGGSCVLSGHNLAKHCLHVVGPNVNKGEDIQLLKSAYENFNQHEVLLAPLLSAGIFGADPIHSLRVCVDTVRTNVYLAVFDKNLYDKLVSSFLEMKSEKQVEQKIAEIPKEEVKPFITESKPSVEQRKQDDKKIKACVEEVTTTLEETKFLTENLLLYIDINGNLHPDSATLVSDIDITFLKKDAPYIVGDVVQEGVLTAVVIPTKKAGGTTEMLAKALRKVPTDNYITTYPGQGLNGYTVEEAKTVLKKCKSAFYILPSIISNEKQEILGTVSWNLREMLAHAEETRKLMPVCVETKAIVSTIQRKYKGIKIQEGVVDYGARFYFYTSKTTVASLINTLNDLNETLVTMPLGYVTHGLNLEEAARYMRSLKVPATVSVSSPDAVTAYNGYLTSSSKTPEEHFIETISLAGSYKDWSYSGQSTQLGIEFLKRGDKSVYYTSNPTTFHLDGEVITFDNLKTLLSLREVRTIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKTFYVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNGLTSIKWADNNCYLATALLTLQQIELKFNPPALQDAYYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLKGVEAVMYMGTLSYEQFKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCIDGALLTKSSEYKGPITDVFYKENSYTTTIKPVTYKLDGVVCTEIDPKLDNYYKKDNSYFTEQPIDLVPNQPYPNASFDNFKFVCDNIKFADDLNQLTGYKKPASRELKVTFFPDLNGDVVAIDYKHYTPSFKKGAKLLHKPIVWHVNNATNKATYKPNTWCIRCLWSTKPVETSNSFDVLKSEDAQGMDNLACEDLKPVSEEVVENPTIQKDVLECNVKTTEVVGDIILKPANNSLKITEEVGHTDLMAAYVDNSSLTIKKPNELSRVLGLKTLATHGLAAVNSVPWDTIANYAKPFLNKVVSTTTNIVTRCLNRVCTNYMPYFFTLLLQLCTFTRSTNSRIKASMPTTIAKNTVKSVGKFCLEASFNYLKSPNFSKLINIIIWFLLLSVCLGSLIYSTAALGVLMSNLGMPSYCTGYREGYLNSTNVTIATYCTGSIPCSVCLSGLDSLDTYPSLETIQITISSFKWDLTAFGLVAEWFLAYILFTRFFYVLGLAAIMQLFFSYFAVHFISNSWLMWLIINLVQMAPISAMVRMYIFFASFYYVWKSYVHVVDGCNSSTCMMCYKRNRATRVECTTIVNGVRRSFYVYANGGKGFCKLHNWNCVNCDTFCAGSTFISDEVARDLSLQFKRPINPTDQSSYIVDSVTVKNGSIHLYFDKAGQKTYERHSLSHFVNLDNLRANNTKGSLPINVIVFDGKSKCEESSAKSASVYYSQLMCQPILLLDQALVSDVGDSAEVAVKMFDAYVNTFSSTFNVPMEKLKTLVATAEAELAKNVSLDNVLSTFISAARQGFVDSDVETKDVVECLKLSHQSDIEVTGDSCNNYMLTYNKVENMTPRDLGACIDCSARHINAQVAKSHNIALIWNVKDFMSLSEQLRKQIRSAAKKNNLPFKLTCATTRQVVNVVTTKIALKGGKIVNNWLKQLIKVTLVFLFVAAIFYLITPVHVMSKHTDFSSEIIGYKAIDGGVTRDIASTDTCFANKHADFDTWFSQRGGSYTNDKACPLIAAVITREVGFVVPGLPGTILRTTNGDFLHFLPRVFSAVGNICYTPSKLIEYTDFATSACVLAAECTIFKDASGKPVPYCYDTNVLEGSVAYESLRPDTRYVLMDGSIIQFPNTYLEGSVRVVTTFDSEYCRHGTCERSEAGVCVSTSGRWVLNNDYYRSLPGVFCGVDAVNLLTNMFTPLIQPIGALDISASIVAGGIVAIVVTCLAYYFMRFRRAFGEYSHVVAFNTLLFLMSFTVLCLTPVYSFLPGVYSVIYLYLTFYLTNDVSFLAHIQWMVMFTPLVPFWITIAYIICISTKHFYWFFSNYLKRRVVFNGVSFSTFEEAALCTFLLNKEMYLKLRSDVLLPLTQYNRYLALYNKYKYFSGAMDTTSYREAACCHLAKALNDFSNSGSDVLYQPPQTSITSAVLQSGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPKYKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTITVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQCSGVTFQSAVKRTIKGTHHWLLLTILTSLLVLVQSTQWSLFFFLYENAFLPFAMGIIAMSAFAMMFVKHKHAFLCLFLLPSLATVAYFNMVYMPASWVMRIMTWLDMVDTSLSGFKLKDCVMYASAVVLLILMTARTVYDDGARRVWTLMNVLTLVYKVYYGNALDQAISMWALIISVTSNYSGVVTTVMFLARGIVFMCVEYCPIFFITGNTLQCIMLVYCFLGYFCTCYFGLFCLLNRYFRLTLGVYDYLVSTQEFRYMNSQGLLPPKNSIDAFKLNIKLLGVGGKPCIKVATVQSKMSDVKCTSVVLLSVLQQLRVESSSKLWAQCVQLHNDILLAKDTTEAFEKMVSLLSVLLSMQGAVDINKLCEEMLDNRATLQAIASEFSSLPSYAAFATAQEAYEQAVANGDSEVVLKKLKKSLNVAKSEFDRDAAMQRKLEKMADQAMTQMYKQARSEDKRAKVTSAMQTMLFTMLRKLDNDALNNIINNARDGCVPLNIIPLTTAAKLMVVIPDYNTYKNTCDGTTFTYASALWEIQQVVDADSKIVQLSEISMDNSPNLAWPLIVTALRANSAVKLQNNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQAGNATEVPANSTVLSFCAFAVDAAKAYKDYLASGGQPITNCVKMLCTHTGTGQAITVTPEANMDQESFGGASCCLYCRCHIDHPNPKGFCDLKGKYVQIPTTCANDPVGFTLKNTVCTVCGMWKGYGCSCDQLREPMLQSADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQAVGACVLCNSQTSLRCGACIRRPFLCCKCCYDHVISTSHKLVLSVNPYVCNAPGCDVTDVTQLYLGGMSYYCKSHKPPISFPLCANGQVFGLYKNTCVGSDNVTDFNAIATCDWTNAGDYILANTCTERLKLFAAETLKATEETFKLSYGIATVREVLSDRELHLSWEVGKPRPPLNRNYVFTGYRVTKNSKVQIGEYTFEKGDYGDAVVYRGTTTYKLNVGDYFVLTSHTVMPLSAPTLVPQEHYVRITGLYPTLNISDEFSSNVANYQKVGMQKYSTLQGPPGTGKSHFAIGLALYYPSARIVYTACSHAAVDALCEKALKYLPIDKCSRIIPARARVECFDKFKVNSTLEQYVFCTVNALPETTADIVVFDEISMATNYDLSVVNARLRAKHYVYIGDPAQLPAPRTLLTKGTLEPEYFNSVCRLMKTIGPDMFLGTCRRCPAEIVDTVSALVYDNKLKAHKDKSAQCFKMFYKGVITHDVSSAINRPQIGVVREFLTRNPAWRKAVFISPYNSQNAVASKILGLPTQTVDSSQGSEYDYVIFTQTTETAHSCNVNRFNVAITRAKVGILCIMSDRDLYDKLQFTSLEIPRRNVATLQAENVTGLFKDCSKVITGLHPTQAPTHLSVDTKFKTEGLCVDIPGIPKDMTYRRLISMMGFKMNYQVNGYPNMFITREEAIRHVRAWIGFDVEGCHATREAVGTNLPLQLGFSTGVNLVAVPTGYVDTPNNTDFSRVSAKPPPGDQFKHLIPLMYKGLPWNVVRIKIVQMLSDTLKNLSDRVVFVLWAHGFELTSMKYFVKIGPERTCCLCDRRATCFSTASDTYACWHHSIGFDYVYNPFMIDVQQWGFTGNLQSNHDLYCQVHGNAHVASCDAIMTRCLAVHECFVKRVDWTIEYPIIGDELKINAACRKVQHMVVKAALLADKFPVLHDIGNPKAIKCVPQADVEWKFYDAQPCSDKAYKIEELFYSYATHSDKFTDGVCLFWNCNVDRYPANSIVCRFDTRVLSNLNLPGCDGGSLYVNKHAFHTPAFDKSAFVNLKQLPFFYYSDSPCESHGKQVVSDIDYVPLKSATCITRCNLGGAVCRHHANEYRLYLDAYNMMISAGFSLWVYKQFDTYNLWNTFTRLQSLENVAFNVVNKGHFDGQQGEVPVSIINNTVYTKVDGVDVELFENKTTLPVNVAFELWAKRNIKPVPEVKILNNLGVDIAANTVIWDYKRDAPAHISTIGVCSMTDIAKKPTETICAPLTVFFDGRVDGQVDLFRNARNGVLITEGSVKGLQPSVGPKQASLNGVTLIGEAVKTQFNYYKKVDGVVQQLPETYFTQSRNLQEFKPRSQMEIDFLELAMDEFIERYKLEGYAFEHIVYGDFSHSQLGGLHLLIGLAKRFKESPFELEDFIPMDSTVKNYFITDAQTGSSKCVCSVIDLLLDDFVEIIKSQDLSVVSKVVKVTIDYTEISFMLWCKDGHVETFYPKLQSSQAWQPGVAMPNLYKMQRMLLEKCDLQNYGDSATLPKGIMMNVAKYTQLCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGTAVLRQWLPTGTLLVDSDLNDFVSDADSTLIGDCATVHTANKWDLIISDMYDPKTKNVTKENDSKEGFFTYICGFIQQKLALGGSVAIKITEHSWNADLYKLMGHFAWWTAFVTNVNASSSEAFLIGCNYLGKPREQIDGYVMHANYIFWRNTNPIQLSSYSLFDMSKFPLKLRGTAVMSLKEGQINDMILSLLSKGRLIIRENNRVVISSDVLVNN'
ans = struct with fields: A: 375 R: 558 N: 472 D: 290 C: 635 Q: 325 E: 270 G: 394 H: 332 I: 436 L: 886 K: 413 M: 117 F: 593 P: 292 S: 810 T: 679 W: 263 Y: 505 V: 548
covidpro = struct with fields: LocusName: 'YP_009724389' LocusSequenceLength: '7096' LocusNumberofStrands: '' LocusTopology: 'linear' LocusMoleculeType: '' LocusGenBankDivision: 'VRL' LocusModificationDate: '18-JUL-2020' Definition: 'ORF1ab polyprotein [Severe acute respiratory syndrome coronavirus 2].' Accession: 'YP_009724389' Version: 'YP_009724389.1' GI: '' Project: [] DBLink: 'BioProject: PRJNA485481 DBSOURCE REFSEQ: accession NC_045512.2' Keywords: 'RefSeq.' Segment: [] Source: 'Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)' SourceOrganism: [4×65 char] Reference: {[1×1 struct] [1×1 struct] [1×1 struct]} Comment: [17×67 char] Features: [431×74 char] CDS: [1×1 struct] Sequence: 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SearchURL: 'https://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&id=YP_009724389' RetrieveURL: 'https://eutils.ncbi.nlm.nih.gov/entrez/eutils/efetch.fcgi?db=protein&id=1796318597&rettype=gp&retmode=text'
covidproAC = struct with fields: C: 35644 H: 55333 N: 9253 O: 10496 S: 394
ans = 35644
covidproMW = 7.9405e+05
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